RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 BSPRYQ5W0U4 402 aa10.36□□□□□ -0.75
COPS4-211ENST00000511891 GJB7Q6PEY0 223 aa10.36□□□□□ -0.75
COPS4-211ENST00000511891 LCLAT1Q6UWP7 414 aa10.36□□□□□ -0.75
COPS4-211ENST00000511891 FMNL3Q8IVF7 1028 aa10.36□□□□□ -0.75
COPS4-211ENST00000511891 SIX6OS1Q8N1H7 587 aa10.36□□□□□ -0.75
COPS4-211ENST00000511891 PGBD3Q8N328 593 aa10.36□□□□□ -0.75
COPS4-211ENST00000511891 TRIML1Q8N9V2 468 aa10.36□□□□□ -0.75
COPS4-211ENST00000511891 OLIG1Q8TAK6 271 aa10.36□□□□□ -0.75
COPS4-211ENST00000511891 NETO1Q8TDF5 533 aa10.36□□□□□ -0.75
COPS4-211ENST00000511891 CLEC4CQ8WTT0 213 aa10.36□□□□□ -0.75
COPS4-211ENST00000511891 KCTD13Q8WZ19 329 aa10.36□□□□□ -0.75
COPS4-211ENST00000511891 CRACR2AQ9BSW2 395 aa10.36□□□□□ -0.75
COPS4-211ENST00000511891 POLMQ9NP87 494 aaPredicted RBP10.36□□□□□ -0.75
COPS4-211ENST00000511891 KIAA1257Q9ULG3 409 aa10.36□□□□□ -0.75
COPS4-211ENST00000511891 STRIP2Q9ULQ0 834 aa10.36□□□□□ -0.75
COPS4-211ENST00000511891 CLEC4EQ9ULY5 219 aa10.36□□□□□ -0.75
COPS4-211ENST00000511891 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.36□□□□□ -0.75
COPS4-211ENST00000511891 MYO18AQ92614 2054 aaKnown RBP10.36□□□□□ -0.75
COPS4-211ENST00000511891 ABCA7Q8IZY2 2146 aa10.36□□□□□ -0.75
COPS4-211ENST00000511891 WASH3PC4AMC7 463 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 SLC30A4O14863 429 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 MSI1O43347 362 aaKnown RBP10.35□□□□□ -0.75
COPS4-211ENST00000511891 RHOBTB1O94844 696 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 PENKP01210 267 aaPredicted RBP10.35□□□□□ -0.75
COPS4-211ENST00000511891 KRT5P13647 590 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 HOXB2P14652 356 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 GABRG2P18507 467 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 NTSR1P30989 418 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 ZNF132P52740 706 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 DAOAP59103 153 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 GCNT1Q02742 428 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 TRIP4Q15650 581 aaPredicted RBP10.35□□□□□ -0.75
COPS4-211ENST00000511891 CNGA2Q16280 664 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 PREPLQ4J6C6 727 aaPredicted RBP10.35□□□□□ -0.75
COPS4-211ENST00000511891 PLA2G2CQ5R387 149 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 PMS2CLQ68D20 193 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 KIAA1211LQ6NV74 962 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 NUDT18Q6ZVK8 323 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 ARMCX6Q7L4S7 300 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 CHPFQ8IZ52 775 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 C12orf50Q8NA57 414 aaPredicted RBP10.35□□□□□ -0.75
COPS4-211ENST00000511891 RNF139Q8WU17 664 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 SLC35F5Q8WV83 523 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 RTKNQ9BST9 563 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 MFRPQ9BY79 579 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 DCLK3Q9C098 648 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 UBE2TQ9NPD8 197 aaPredicted RBP10.35□□□□□ -0.75
COPS4-211ENST00000511891 ACP6Q9NPH0 428 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 CACNA2D2Q9NY47 1150 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 MBD1Q9UIS9 605 aaPredicted RBP10.35□□□□□ -0.75
COPS4-211ENST00000511891 RWDD2AQ9UIY3 292 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 FBXO10Q9UK96 956 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 ZNF510Q9Y2H8 683 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 PCDHGA5Q9Y5G8 931 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 RAD54BQ9Y620 910 aa10.35□□□□□ -0.75
COPS4-211ENST00000511891 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 A0A1W2PQF6 199 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 BCLAF3A2AJT9 711 aaKnown RBP10.34□□□□□ -0.75
COPS4-211ENST00000511891 TSPAN3O60637 253 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 FGFR1OPO95684 399 aaKnown RBP10.34□□□□□ -0.75
COPS4-211ENST00000511891 CAVIN2O95810 425 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 SDHBP21912 280 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 CHKAP35790 457 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 P2RY2P41231 377 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 DHPSP49366 369 aaPredicted RBP10.34□□□□□ -0.75
COPS4-211ENST00000511891 MFAP3P55082 362 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 GEN1Q17RS7 908 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 MAP7D1Q3KQU3 841 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 DENND1BQ6P3S1 775 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 TRMT11Q7Z4G4 463 aaKnown RBP10.34□□□□□ -0.75
COPS4-211ENST00000511891 IRF2BP1Q8IU81 584 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 TMEFF1Q8IYR6 380 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 SCML4Q8N228 414 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 DEFB119Q8N690 84 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 KCNV2Q8TDN2 545 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 DDI1Q8WTU0 396 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 PLD4Q96BZ4 506 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 MIS12Q9H081 205 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 SLC6A17Q9H1V8 727 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 CLSTN2Q9H4D0 955 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 CNGB3Q9NQW8 809 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 ABCC13Q9NSE7 274 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 OLA1Q9NTK5 396 aaKnown RBP10.34□□□□□ -0.75
COPS4-211ENST00000511891 STARD13Q9Y3M8 1113 aa10.34□□□□□ -0.75
COPS4-211ENST00000511891 PATE3B3GLJ2 98 aa10.33□□□□□ -0.76
COPS4-211ENST00000511891 LETM1O95202 739 aaPredicted RBP10.33□□□□□ -0.76
COPS4-211ENST00000511891 LTFP02788 710 aa10.33□□□□□ -0.76
COPS4-211ENST00000511891 NDUFV2P19404 249 aa10.33□□□□□ -0.76
COPS4-211ENST00000511891 SLC9A1P19634 815 aa10.33□□□□□ -0.76
COPS4-211ENST00000511891 HARS2P49590 506 aaKnown RBP10.33□□□□□ -0.76
COPS4-211ENST00000511891 SGSHP51688 502 aa10.33□□□□□ -0.76
COPS4-211ENST00000511891 STILQ15468 1287 aa10.33□□□□□ -0.76
COPS4-211ENST00000511891 TRIM65Q6PJ69 517 aa10.33□□□□□ -0.76
COPS4-211ENST00000511891 CYP2U1Q7Z449 544 aa10.33□□□□□ -0.76
COPS4-211ENST00000511891 FAM217AQ8IXS0 508 aa10.33□□□□□ -0.76
COPS4-211ENST00000511891 CPXM2Q8N436 756 aa10.33□□□□□ -0.76
COPS4-211ENST00000511891 IPO4Q8TEX9 1081 aaKnown RBP10.33□□□□□ -0.76
COPS4-211ENST00000511891 SORCS1Q8WY21 1168 aa10.33□□□□□ -0.76
COPS4-211ENST00000511891 PIWIL1Q96J94 861 aaKnown RBP10.33□□□□□ -0.76
COPS4-211ENST00000511891 SPACA7Q96KW9 195 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms