RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ACE2Q9BYF1 805 aaPredicted RBP12.19□□□□□ -0.46
RNF4-216ENST00000511859 TRIM9Q9C026 710 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 BTBD1Q9H0C5 482 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 OLFML3Q9NRN5 406 aa12.19□□□□□ -0.46
RNF4-216ENST00000511859 VILLO15195 856 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 YKT6O15498 198 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 SEMA4FO95754 770 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 PENKP01210 267 aaPredicted RBP12.18□□□□□ -0.46
RNF4-216ENST00000511859 ITGAVP06756 1048 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 ABCB4P21439 1286 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 ACADVLP49748 655 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 BCAT1P54687 386 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 TMPRSS3P57727 454 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 RACK1P63244 317 aaKnown RBP12.18□□□□□ -0.46
RNF4-216ENST00000511859 IL9RQ01113 521 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 ZBTB16Q05516 673 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 DNAJC3Q13217 504 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 KCNT1Q5JUK3 1230 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 BROXQ5VW32 411 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 SERPINA13PQ6UXR4 307 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 Q6ZNB5 142 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 PAQR9Q6ZVX9 377 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 ANKS1BQ7Z6G8 1248 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 ERICH1Q86X53 443 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 TSC1Q92574 1164 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 SMARCD1Q96GM5 515 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 PIWIL1Q96J94 861 aaKnown RBP12.18□□□□□ -0.46
RNF4-216ENST00000511859 LGMNQ99538 433 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 ELF4Q99607 663 aaPredicted RBP12.18□□□□□ -0.46
RNF4-216ENST00000511859 MED10Q9BTT4 135 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 LHX5Q9H2C1 402 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 SGK2Q9HBY8 427 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 KIAA1586Q9HCI6 787 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 TBC1D7Q9P0N9 293 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 PGFP49763 221 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 CLDN6P56747 220 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 ARID5AQ03989 594 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 CAMK2GQ13555 558 aaPredicted RBP12.18□□□□□ -0.46
RNF4-216ENST00000511859 FYB2Q5VWT5 728 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 FAM35AQ86V20 835 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 GATAD2AQ86YP4 633 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 FMNL3Q8IVF7 1028 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 SAP25Q8TEE9 199 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 TNIP3Q96KP6 325 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 ARID3AQ99856 593 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 FBRSQ9HAH7 460 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 CLCA2Q9UQC9 943 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 KIF3AQ9Y496 699 aa12.18□□□□□ -0.46
RNF4-216ENST00000511859 DOPEY2Q9Y3R5 2298 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 AP1G2O75843 785 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 FSBPO95073 299 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 STAU1O95793 577 aaKnown RBP12.17□□□□□ -0.46
RNF4-216ENST00000511859 TNNI1P19237 187 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 PRKCHP24723 683 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 ATICP31939 592 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 LAYNQ6UX15 382 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 TADA2BQ86TJ2 420 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 CACUL1Q86Y37 369 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 ZNF276Q8N554 614 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 RBBP8NLQ8NC74 664 aaPredicted RBP12.17□□□□□ -0.46
RNF4-216ENST00000511859 RFFLQ8WZ73 363 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 DNAJC19Q96DA6 116 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 ZNF578Q96N58 590 aaPredicted RBP12.17□□□□□ -0.46
RNF4-216ENST00000511859 SLC2A11Q9BYW1 496 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 CIPCQ9C0C6 399 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 CSNK1G1Q9HCP0 422 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 STK17AQ9UEE5 414 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 PLA2G4CQ9UP65 541 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 SCML2Q9UQR0 700 aa12.17□□□□□ -0.46
RNF4-216ENST00000511859 CBX4O00257 560 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 BMP15O95972 392 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 DNTTP04053 509 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 CYBBP04839 570 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 GLDCP23378 1020 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 CSRP3P50461 194 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 CASP5P51878 434 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 PCBP4P57723 403 aaKnown RBP12.16□□□□□ -0.46
RNF4-216ENST00000511859 COG7P83436 770 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 SRSF1Q07955 248 aaKnown RBP eCLIP12.16□□□□□ -0.464e-6■□□□□ 8.1
RNF4-216ENST00000511859 TRPC3Q13507 836 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 ARHGAP40Q5TG30 622 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 SV2BQ7L1I2 683 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 CBWD2Q8IUF1 395 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 LSMEM2Q8N112 164 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 EID2Q8N6I1 236 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 DCBLD1Q8N8Z6 715 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 SNRNP27Q8WVK2 155 aaKnown RBP12.16□□□□□ -0.46
RNF4-216ENST00000511859 MED8Q96G25 268 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 P2RY11Q96G91 374 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 ORAI3Q9BRQ5 295 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 DCLK3Q9C098 648 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 SEMA4CQ9C0C4 833 aa12.16□□□□□ -0.46
RNF4-216ENST00000511859 USP9XQ93008 2570 aaPredicted RBP12.15□□□□□ -0.46
RNF4-216ENST00000511859 A0A1W2PPC4 97 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 SLC28A2O43868 658 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 STC2O76061 302 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 RARGP13631 454 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 CKMT2P17540 419 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 ARRB1P49407 418 aaPredicted RBP12.15□□□□□ -0.46
RNF4-216ENST00000511859 PSEN1P49768 467 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms