RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 VRTNQ9H8Y1 702 aa20.01■□□□□ 0.79
HMGCS1-206ENST00000511774 ELOVL2Q9NXB9 296 aa20.01■□□□□ 0.79
HMGCS1-206ENST00000511774 EPHX1P07099 455 aa20■□□□□ 0.79
HMGCS1-206ENST00000511774 ATICP31939 592 aa20■□□□□ 0.79
HMGCS1-206ENST00000511774 CTSKP43235 329 aa20■□□□□ 0.79
HMGCS1-206ENST00000511774 GRIA4P48058 902 aa20■□□□□ 0.79
HMGCS1-206ENST00000511774 ZNF132P52740 706 aa20■□□□□ 0.79
HMGCS1-206ENST00000511774 SEMG2Q02383 582 aa20■□□□□ 0.79
HMGCS1-206ENST00000511774 CCDC65Q8IXS2 484 aa20■□□□□ 0.79
HMGCS1-206ENST00000511774 ZNF366Q8N895 744 aa20■□□□□ 0.79
HMGCS1-206ENST00000511774 ZNF507Q8TCN5 953 aa20■□□□□ 0.79
HMGCS1-206ENST00000511774 IGSF8Q969P0 613 aa20■□□□□ 0.79
HMGCS1-206ENST00000511774 SYAP1Q96A49 352 aaPredicted RBP20■□□□□ 0.79
HMGCS1-206ENST00000511774 BIRC7Q96CA5 298 aa20■□□□□ 0.79
HMGCS1-206ENST00000511774 TNIP3Q96KP6 325 aa20■□□□□ 0.79
HMGCS1-206ENST00000511774 SPTA1P02549 2419 aa20■□□□□ 0.79
HMGCS1-206ENST00000511774 E9PAM4 449 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 NPC1O15118 1278 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 ACADMP11310 421 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 PLA2G4AP47712 749 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 CCT8P50990 548 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 ZNF699Q32M78 642 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 C10orf120Q5SQS8 335 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 PRAMEF14Q5SWL7 426 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 KLHDC10Q6PID8 442 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 CLEC20AQ6ZU45 233 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 ANKS1BQ7Z6G8 1248 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 TMPRSS12Q86WS5 348 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 GATAD2AQ86YP4 633 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 PDILTQ8N807 584 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 FCRL3Q96P31 734 aaPredicted RBP19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 PCED1AQ9H1Q7 454 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 OSGEPQ9NPF4 335 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 FTSJ1Q9UET6 329 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 DNMT3LQ9UJW3 386 aa19.99■□□□□ 0.79
HMGCS1-206ENST00000511774 HMBSP08397 361 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 C7P10643 843 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 ADORA2BP29275 332 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 NDST1P52848 882 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 GOLGA8FQ08AF8 430 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 GOLGA8DPQ0D2H9 430 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 DNAJC3Q13217 504 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 CAMK2GQ13555 558 aaPredicted RBP19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 CCDC73Q6ZRK6 1079 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 ZNF605Q86T29 641 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 NELFCDQ8IXH7 590 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 CRYBG2Q8N1P7 616 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 XXYLT1Q8NBI6 393 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 OR2T3Q8NH03 318 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 NXPE2Q96DL1 559 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 TWNKQ96RR1 684 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 CIPCQ9C0C6 399 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 LHX5Q9H2C1 402 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 SMC3Q9UQE7 1217 aa19.98■□□□□ 0.79
HMGCS1-206ENST00000511774 EIF3DO15371 548 aaKnown RBP eCLIP19.97■□□□□ 0.79
HMGCS1-206ENST00000511774 PAPSS1O43252 624 aaPredicted RBP19.97■□□□□ 0.79
HMGCS1-206ENST00000511774 TSPAN3O60637 253 aa19.97■□□□□ 0.79
HMGCS1-206ENST00000511774 EIF5BO60841 1220 aaKnown RBP19.97■□□□□ 0.79
HMGCS1-206ENST00000511774 CEBPZQ03701 1054 aaKnown RBP19.97■□□□□ 0.79
HMGCS1-206ENST00000511774 SHBQ15464 509 aa19.97■□□□□ 0.79
HMGCS1-206ENST00000511774 BMT2Q1RMZ1 405 aa19.97■□□□□ 0.79
HMGCS1-206ENST00000511774 ZNF667Q5HYK9 610 aa19.97■□□□□ 0.79
HMGCS1-206ENST00000511774 SERPINA13PQ6UXR4 307 aa19.97■□□□□ 0.79
HMGCS1-206ENST00000511774 UCMAQ8WVF2 138 aa19.97■□□□□ 0.79
HMGCS1-206ENST00000511774 AGO1Q9UL18 857 aaKnown RBP19.97■□□□□ 0.79
HMGCS1-206ENST00000511774 LRRIQ3A6PVS8 624 aaPredicted RBP19.96■□□□□ 0.79
HMGCS1-206ENST00000511774 PHACTR2O75167 634 aa19.96■□□□□ 0.79
HMGCS1-206ENST00000511774 SEMA4FO95754 770 aa19.96■□□□□ 0.79
HMGCS1-206ENST00000511774 C4BPAP04003 597 aaKnown RBP19.96■□□□□ 0.79
HMGCS1-206ENST00000511774 IGHV4-34P06331 123 aa19.96■□□□□ 0.79
HMGCS1-206ENST00000511774 CORO1AP31146 461 aaKnown RBP19.96■□□□□ 0.79
HMGCS1-206ENST00000511774 TXLNAP40222 546 aa19.96■□□□□ 0.79
HMGCS1-206ENST00000511774 TARDBPQ13148 414 aaKnown RBP eCLIP19.96■□□□□ 0.79
HMGCS1-206ENST00000511774 NCOA4Q13772 614 aa19.96■□□□□ 0.79
HMGCS1-206ENST00000511774 TEAD4Q15561 434 aa19.96■□□□□ 0.79
HMGCS1-206ENST00000511774 CYB5D2Q8WUJ1 264 aa19.96■□□□□ 0.79
HMGCS1-206ENST00000511774 A0A1B0GTQ1 180 aa19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 ENC1O14682 589 aa19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 FSBPO95073 299 aa19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 WNT1P04628 370 aa19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 FAM200BP0CF97 657 aa19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 JUPP14923 745 aa19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 CD27P26842 260 aa19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 KIF11P52732 1056 aa19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 BIRC3Q13489 604 aa19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 E2F4Q16254 413 aa19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 SPOPLQ6IQ16 392 aa19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 STXBP4Q6ZWJ1 553 aa19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 ZC3H3Q8IXZ2 948 aaKnown RBP19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 LSM14AQ8ND56 463 aaKnown RBP19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 TMEM245Q9H330 911 aa19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 EBF2Q9HAK2 575 aa19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 NAGPAQ9UK23 515 aa19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 PIEZO2Q9H5I5 2752 aa19.95■□□□□ 0.78
HMGCS1-206ENST00000511774 ASPAP45381 313 aa19.94■□□□□ 0.78
HMGCS1-206ENST00000511774 ACADVLP49748 655 aa19.94■□□□□ 0.78
HMGCS1-206ENST00000511774 RPS14P62263 151 aaKnown RBP19.94■□□□□ 0.78
HMGCS1-206ENST00000511774 RTP5Q14D33 572 aa19.94■□□□□ 0.78
HMGCS1-206ENST00000511774 EIF4HQ15056 248 aaKnown RBP19.94■□□□□ 0.78
HMGCS1-206ENST00000511774 RABEP1Q15276 862 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms