RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 MTA1Q13330 715 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 WDR59Q6PJI9 974 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 SND1Q7KZF4 910 aaKnown RBP eCLIP13.39□□□□□ -0.27
COL6A6-203ENST00000511332 DENND1CQ8IV53 801 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 ADAM32Q8TC27 787 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 EPHX3Q9H6B9 360 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 TAS2R14Q9NYV8 317 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 TMEM59LQ9UK28 342 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 MRPS17Q9Y2R5 130 aaKnown RBP13.39□□□□□ -0.27
COL6A6-203ENST00000511332 PAXBP1Q9Y5B6 917 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 SCINQ9Y6U3 715 aa13.39□□□□□ -0.27
COL6A6-203ENST00000511332 SPECC1L-ADORA2AF8WAN1 911 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 M0QYT0 321 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 FTLP02792 175 aaPredicted RBP13.38□□□□□ -0.27
COL6A6-203ENST00000511332 ADH5P11766 374 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 KRT3P12035 628 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 SDC4P31431 198 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 FLT3P36888 993 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 EIF4A3P38919 411 aaKnown RBP13.38□□□□□ -0.27
COL6A6-203ENST00000511332 SLC11A2P49281 568 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 STARD6P59095 220 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 SLC18A3Q16572 532 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 SLC25A52Q3SY17 297 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 ZNF852Q6ZMS4 543 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 TC2NQ8N9U0 490 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 WBP2Q969T9 261 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 ZNF653Q96CK0 615 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 PGAP3Q96FM1 320 aaPredicted RBP13.38□□□□□ -0.27
COL6A6-203ENST00000511332 FCRL2Q96LA5 508 aaPredicted RBP13.38□□□□□ -0.27
COL6A6-203ENST00000511332 NPY6RQ99463 290 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 DDX50Q9BQ39 737 aaKnown RBP13.38□□□□□ -0.27
COL6A6-203ENST00000511332 DDX23Q9BUQ8 820 aaKnown RBP13.38□□□□□ -0.27
COL6A6-203ENST00000511332 ISCUQ9H1K1 167 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 TBC1D17Q9HA65 648 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 SPHK2Q9NRA0 654 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 PARVAQ9NVD7 372 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 IMPACTQ9P2X3 320 aa13.38□□□□□ -0.27
COL6A6-203ENST00000511332 AGO1Q9UL18 857 aaKnown RBP13.38□□□□□ -0.27
COL6A6-203ENST00000511332 SYNJ2BP-COX16A0A087WUM0 186 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 A0A087X0T9 212 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 GOLGA6L3A6NEY3 463 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 SIGLEC16A6NMB1 481 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 HOXC11O43248 304 aaPredicted RBP13.37□□□□□ -0.27
COL6A6-203ENST00000511332 AKR1B10O60218 316 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 F9P00740 461 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 KLKB1P03952 638 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 FAM228BP0C875 321 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 ABCB4P21439 1286 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 RRM1P23921 792 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 CCR1P32246 355 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 GJA4P35212 333 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 PTPN9P43378 593 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 PITX1P78337 314 aaPredicted RBP13.37□□□□□ -0.27
COL6A6-203ENST00000511332 GAD2Q05329 585 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 NME3Q13232 169 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 PPP2R5DQ14738 602 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 DHCR24Q15392 516 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 ALKBH5Q6P6C2 394 aaKnown RBP13.37□□□□□ -0.27
COL6A6-203ENST00000511332 DCUN1D2Q6PH85 259 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 BMP8AQ7Z5Y6 402 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 FAM217AQ8IXS0 508 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 ADGRG2Q8IZP9 1017 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 CPXM2Q8N436 756 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 EMC1Q8N766 993 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 ATP6V0D2Q8N8Y2 350 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 TTC8Q8TAM2 541 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 RNF34Q969K3 372 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 NT5C3BQ969T7 300 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 AZIN2Q96A70 460 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 SLC39A13Q96H72 371 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 BTN2A3PQ96KV6 586 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 CCDC42Q96M95 316 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 MCEEQ96PE7 176 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 PANX2Q96RD6 677 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 IRX2Q9BZI1 471 aaPredicted RBP13.37□□□□□ -0.27
COL6A6-203ENST00000511332 LINC00597Q9H2U6 94 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 MRPL47Q9HD33 250 aaKnown RBP13.37□□□□□ -0.27
COL6A6-203ENST00000511332 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL6A6-203ENST00000511332 MARK1Q9P0L2 795 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 COX16Q9P0S2 106 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 CNOT8Q9UFF9 292 aaKnown RBP13.37□□□□□ -0.27
COL6A6-203ENST00000511332 SLC12A6Q9UHW9 1150 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 STOML2Q9UJZ1 356 aa13.37□□□□□ -0.27
COL6A6-203ENST00000511332 TCRBV5S1A1TA0A578 114 aa13.36□□□□□ -0.27
COL6A6-203ENST00000511332 KANSL1LA0AUZ9 987 aa13.36□□□□□ -0.27
COL6A6-203ENST00000511332 TYW5A2RUC4 315 aaKnown RBP13.36□□□□□ -0.27
COL6A6-203ENST00000511332 OTOL1A6NHN0 477 aaPredicted RBP13.36□□□□□ -0.27
COL6A6-203ENST00000511332 C2CD4BA6NLJ0 364 aa13.36□□□□□ -0.27
COL6A6-203ENST00000511332 PRR33A8MZF0 331 aa13.36□□□□□ -0.27
COL6A6-203ENST00000511332 STK25O00506 426 aa13.36□□□□□ -0.27
COL6A6-203ENST00000511332 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
COL6A6-203ENST00000511332 GPR37L1O60883 481 aa13.36□□□□□ -0.27
COL6A6-203ENST00000511332 CYBBP04839 570 aa13.36□□□□□ -0.27
COL6A6-203ENST00000511332 PDGFRAP16234 1089 aa13.36□□□□□ -0.27
COL6A6-203ENST00000511332 GPD1P21695 349 aa13.36□□□□□ -0.27
COL6A6-203ENST00000511332 RDXP35241 583 aaKnown RBP13.36□□□□□ -0.27
COL6A6-203ENST00000511332 EIF2DP41214 584 aaKnown RBP13.36□□□□□ -0.27
COL6A6-203ENST00000511332 SOX9P48436 509 aa13.36□□□□□ -0.27
COL6A6-203ENST00000511332 DEUP1Q05D60 604 aa13.36□□□□□ -0.27
COL6A6-203ENST00000511332 EIF4EBP2Q13542 120 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms