RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 IL12RB1P42701 662 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 YWHAGP61981 247 aaKnown RBP eCLIP8.74□□□□□ -1.01
TRIO-217ENST00000511019 FAM193AP78312 1265 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 PKP1Q13835 747 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 TRIP6Q15654 476 aaKnown RBP8.74□□□□□ -1.01
TRIO-217ENST00000511019 ZNF423Q2M1K9 1284 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 FYB2Q5VWT5 728 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 PIGZQ86VD9 579 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 CPXM2Q8N436 756 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 GUF1Q8N442 669 aaKnown RBP8.74□□□□□ -1.01
TRIO-217ENST00000511019 ANKRD52Q8NB46 1076 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 ZCCHC14Q8WYQ9 949 aaKnown RBP8.74□□□□□ -1.01
TRIO-217ENST00000511019 DNASE2BQ8WZ79 361 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 SIPA1Q96FS4 1042 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 CAMK1GQ96NX5 476 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 NUP58Q9BVL2 599 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 GPR174Q9BXC1 333 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 MIR1-1HGQ9H1L0 117 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 CD93Q9NPY3 652 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 CISHQ9NSE2 258 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 RAB20Q9NX57 234 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 WSB2Q9NYS7 404 aaPredicted RBP8.74□□□□□ -1.01
TRIO-217ENST00000511019 MARCH2Q9P0N8 246 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 KLK13Q9UKR3 277 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 AGO1Q9UL18 857 aaKnown RBP8.74□□□□□ -1.01
TRIO-217ENST00000511019 KIAA1549LQ6ZVL6 1849 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 MYO16Q9Y6X6 1858 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 FRYLO94915 3013 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 PTPRDP23468 1912 aa8.74□□□□□ -1.01
TRIO-217ENST00000511019 SPAG17Q6Q759 2223 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 CETN3O15182 167 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 NCAM1P13591 858 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 HARS2P49590 506 aaKnown RBP8.73□□□□□ -1.01
TRIO-217ENST00000511019 TPMTP51580 245 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 TKTL1P51854 596 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 NDUFA8P51970 172 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 RAD23BP54727 409 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 KRT85P78386 507 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 DPYDQ12882 1025 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 ENPP2Q13822 863 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 ZNF234Q14588 700 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 EIF4HQ15056 248 aaKnown RBP8.73□□□□□ -1.01
TRIO-217ENST00000511019 MPPE1Q53F39 396 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 RAB41Q5JT25 222 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 DCAF12L1Q5VU92 463 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 ARHGAP17Q68EM7 881 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 PM20D1Q6GTS8 502 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 SLC4A11Q8NBS3 891 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 FBXL13Q8NEE6 735 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 SETD7Q8WTS6 366 aaKnown RBP8.73□□□□□ -1.01
TRIO-217ENST00000511019 RNF139Q8WU17 664 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 SEMA4DQ92854 862 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 TATDN2Q93075 761 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 TMA16Q96EY4 203 aaKnown RBP8.73□□□□□ -1.01
TRIO-217ENST00000511019 P2RY11Q96G91 374 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 CCDC34Q96HJ3 373 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 PIWIL1Q96J94 861 aaKnown RBP8.73□□□□□ -1.01
TRIO-217ENST00000511019 CIPCQ9C0C6 399 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 MKRN2Q9H000 416 aaKnown RBP8.73□□□□□ -1.01
TRIO-217ENST00000511019 LRRC4Q9HBW1 653 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 USP36Q9P275 1121 aaKnown RBP8.73□□□□□ -1.01
TRIO-217ENST00000511019 PLA2G4CQ9UP65 541 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 NFE2L3Q9Y4A8 694 aa8.73□□□□□ -1.01
TRIO-217ENST00000511019 SPTBN2O15020 2390 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 FAM237AA0A1B0GTK4 181 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 KCNJ18B7U540 433 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 BCAT2O15382 392 aaPredicted RBP8.72□□□□□ -1.01
TRIO-217ENST00000511019 GJB3O75712 270 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 ZBED1O96006 694 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 EPHX1P07099 455 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 MCCD1P59942 119 aaPredicted RBP8.72□□□□□ -1.01
TRIO-217ENST00000511019 GRIK2Q13002 908 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 TRIP4Q15650 581 aaPredicted RBP8.72□□□□□ -1.01
TRIO-217ENST00000511019 EDRF1Q3B7T1 1238 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 IL27RAQ6UWB1 636 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 LRSAM1Q6UWE0 723 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 SERPINA13PQ6UXR4 307 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 KRBA2Q6ZNG9 492 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 ANKS1BQ7Z6G8 1248 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 RAB44Q7Z6P3 723 aaPredicted RBP8.72□□□□□ -1.01
TRIO-217ENST00000511019 NAXDQ8IW45 347 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 ADAMTS14Q8WXS8 1223 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 PLD4Q96BZ4 506 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 EEF2KMTQ96G04 330 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 ARID3AQ99856 593 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 ULBP1Q9BZM6 244 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 GAREM1Q9H706 876 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 OLA1Q9NTK5 396 aaKnown RBP8.72□□□□□ -1.01
TRIO-217ENST00000511019 HESX1Q9UBX0 185 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 EIF2B4Q9UI10 523 aaKnown RBP8.72□□□□□ -1.01
TRIO-217ENST00000511019 CLEC4EQ9ULY5 219 aa8.72□□□□□ -1.01
TRIO-217ENST00000511019 APOBEC2Q9Y235 224 aaKnown RBP8.72□□□□□ -1.01
TRIO-217ENST00000511019 NUP205Q92621 2012 aa8.71□□□□□ -1.01
TRIO-217ENST00000511019 XPO1O14980 1071 aaKnown RBP8.71□□□□□ -1.02
TRIO-217ENST00000511019 TSPAN3O60637 253 aa8.71□□□□□ -1.02
TRIO-217ENST00000511019 ZNF202O95125 648 aa8.71□□□□□ -1.02
TRIO-217ENST00000511019 IGLV3-19P01714 112 aa8.71□□□□□ -1.02
TRIO-217ENST00000511019 EPB41P11171 864 aaKnown RBP8.71□□□□□ -1.02
TRIO-217ENST00000511019 CD44P16070 742 aaKnown RBP8.71□□□□□ -1.02
TRIO-217ENST00000511019 MATKP42679 507 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms