RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 LRRC74BQ6ZQY2 392 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 NT5DC3Q86UY8 548 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 ZSWIM2Q8NEG5 633 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 WDR48Q8TAF3 677 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 ZFRQ96KR1 1074 aaKnown RBP10.86□□□□□ -0.67
NEK1-206ENST00000510533 ACOX2Q99424 681 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 EMILIN2Q9BXX0 1053 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 ADGRE3Q9BY15 652 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 MMADHCQ9H3L0 296 aaPredicted RBP10.86□□□□□ -0.67
NEK1-206ENST00000510533 COPS7BQ9H9Q2 264 aaPredicted RBP10.86□□□□□ -0.67
NEK1-206ENST00000510533 RGS18Q9NS28 235 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 DSEQ9UL01 958 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 WDR27A2RRH5 827 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 C2CD2LO14523 706 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 ALDH1A2O94788 518 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 TNFAIP8O95379 198 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 MBL2P11226 248 aaPredicted RBP10.86□□□□□ -0.67
NEK1-206ENST00000510533 SSTR1P30872 391 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 THPOP40225 353 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 ALDH7A1P49419 539 aaKnown RBP10.86□□□□□ -0.67
NEK1-206ENST00000510533 ZNF157P51786 506 aaPredicted RBP10.86□□□□□ -0.67
NEK1-206ENST00000510533 TKTL1P51854 596 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 PSMC6P62333 389 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 SLC9A5Q14940 896 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 SPDYCQ5MJ68 293 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 TMEM26Q6ZUK4 368 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 ILDR2Q71H61 639 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 HEATR4Q86WZ0 1026 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 ERO1BQ86YB8 467 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 ARHGEF19Q8IW93 802 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 CARNMT1Q8N4J0 409 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 ZNF606Q8WXB4 792 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 AGXT2Q9BYV1 514 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 ACTR8Q9H981 624 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 DIABLOQ9NR28 239 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 RBM22Q9NW64 420 aaKnown RBP eCLIP10.86□□□□□ -0.67
NEK1-206ENST00000510533 GEMIN8Q9NWZ8 242 aaKnown RBP10.86□□□□□ -0.67
NEK1-206ENST00000510533 FAM20BO75063 409 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 VTNP04004 478 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 RHOCP08134 193 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 GSTM1P09488 218 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 SLC2A4P14672 509 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 HALP42357 657 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 ZNF268Q14587 947 aaPredicted RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 POU6F1Q14863 301 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 SPANXN3Q5MJ09 141 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 ZFP1Q6P2D0 407 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 KCNMB4Q86W47 210 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 TRIM48Q8IWZ4 208 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 C19orf18Q8NEA5 215 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 ZNF75CPQ92670 426 aaPredicted RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 MIEF2Q96C03 454 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 PHF21BQ96EK2 531 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 MPP4Q96JB8 637 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 DPY30Q9C005 99 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 UNKQ9C0B0 810 aaKnown RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 SAR1AQ9NR31 198 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 PXMP2Q9NR77 195 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 NDUFAF1Q9Y375 327 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 C1orf167Q5SNV9 1468 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 PEX1O43933 1283 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 SASH3O75995 380 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 RHOAP61586 193 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 FASTKQ14296 549 aaKnown RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 ZNF284Q2VY69 593 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 NAIF1Q69YI7 327 aaPredicted RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 OR6Y1Q8NGX8 325 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 FIG4Q92562 907 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 CPNE1Q99829 537 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 PARVBQ9HBI1 364 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 DMAP1Q9NPF5 467 aaPredicted RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 KLHL3Q9UH77 587 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 ITGA11Q9UKX5 1188 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 SLC12A8A0AV02 714 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 TMEM114B3SHH9 223 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 PCNAP12004 261 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 ALADP13716 330 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 CRABP2P29373 138 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 TALDO1P37837 337 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 SLC26A2P50443 739 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 CDK16Q00536 496 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 USP39Q53GS9 565 aaKnown RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 SAMD7Q7Z3H4 446 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 STK32AQ8WU08 396 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 PRCCQ92733 491 aaPredicted RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 C19orf60Q96EN9 201 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 MAGED4Q96JG8 741 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 EHD4Q9H223 541 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 SLC25A13Q9UJS0 675 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 ANKRD6Q9Y2G4 727 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 MROH7Q68CQ1 1323 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 DDX3XO00571 662 aaKnown RBP eCLIP10.85□□□□□ -0.675e-16■■□□□ 13.2
NEK1-206ENST00000510533 CLOCKO15516 846 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 SNUPNO95149 360 aaKnown RBP10.85□□□□□ -0.67
NEK1-206ENST00000510533 KRT6AP02538 564 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 KRT6BP04259 564 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 CXCL8P10145 99 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 ME2P23368 584 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 RFX3P48380 749 aa10.85□□□□□ -0.67
NEK1-206ENST00000510533 KRT6CP48668 564 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms