RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 PRR11Q96HE9 360 aaPredicted RBP11.41□□□□□ -0.58
SNF8-207ENST00000509995 GZF1Q9H116 711 aaPredicted RBP11.41□□□□□ -0.58
SNF8-207ENST00000509995 ERVMER34-1Q9H9K5 563 aa11.41□□□□□ -0.58
SNF8-207ENST00000509995 EBF2Q9HAK2 575 aa11.41□□□□□ -0.58
SNF8-207ENST00000509995 GEMIN8Q9NWZ8 242 aaKnown RBP11.41□□□□□ -0.58
SNF8-207ENST00000509995 SNX14Q9Y5W7 946 aa11.41□□□□□ -0.58
SNF8-207ENST00000509995 CELSR1Q9NYQ6 3014 aa11.41□□□□□ -0.58
SNF8-207ENST00000509995 A0A1B0GVM2 712 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 H0YCG3 227 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 YWHAQP27348 245 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 TNFRSF8P28908 595 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 CASRP41180 1078 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 DUSP3P51452 185 aaPredicted RBP11.4□□□□□ -0.58
SNF8-207ENST00000509995 NCKAP1LP55160 1127 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 ZBTB16Q05516 673 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 ISXQ2M1V0 245 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 KRTAP21-3Q3LHN1 58 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 TTC31Q49AM3 519 aaPredicted RBP11.4□□□□□ -0.58
SNF8-207ENST00000509995 SNX30Q5VWJ9 437 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 SLC39A4Q6P5W5 647 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 ANKS1BQ7Z6G8 1248 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 P2RY11Q96G91 374 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 PCED1BQ96HM7 432 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 NACA2Q9H009 215 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 TMEM30AQ9NV96 361 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 WDR70Q9NW82 654 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 GDAP2Q9NXN4 497 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 CDH9Q9ULB4 789 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 DNM3Q9UQ16 869 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 SNX9Q9Y5X1 595 aa11.4□□□□□ -0.58
SNF8-207ENST00000509995 PMS2P1A4D2B8 440 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 FAM47DPA6NHR8 397 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 TLR4O00206 839 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 WNT9AO14904 365 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 SDC3O75056 442 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 ITGB3P05106 788 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 GP1BAP07359 652 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 LMO2P25791 158 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 CACNA2D1P54289 1103 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 NCAPHQ15003 741 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 EIF4HQ15056 248 aaKnown RBP11.39□□□□□ -0.59
SNF8-207ENST00000509995 TBR1Q16650 682 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 SOWAHAQ2M3V2 549 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 NT5DC4Q86YG4 428 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 TICAM1Q8IUC6 712 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 ARL14Q8N4G2 192 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 LRRC52Q8N7C0 313 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 RBBP8NLQ8NC74 664 aaPredicted RBP11.39□□□□□ -0.59
SNF8-207ENST00000509995 SNX29Q8TEQ0 813 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 SORCS1Q8WY21 1168 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 ATXN7L3BQ96GX2 97 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 ZNF768Q9H5H4 540 aaKnown RBP11.39□□□□□ -0.59
SNF8-207ENST00000509995 ELOVL2Q9NXB9 296 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 ORC3Q9UBD5 711 aaPredicted RBP11.39□□□□□ -0.59
SNF8-207ENST00000509995 LSM7Q9UK45 103 aaKnown RBP11.39□□□□□ -0.59
SNF8-207ENST00000509995 AGAP1Q9UPQ3 857 aa11.39□□□□□ -0.59
SNF8-207ENST00000509995 TDRD6O60522 2096 aaKnown RBP11.39□□□□□ -0.59
SNF8-207ENST00000509995 DTNBO60941 627 aa11.38□□□□□ -0.59
SNF8-207ENST00000509995 RTN3O95197 1032 aaPredicted RBP11.38□□□□□ -0.59
SNF8-207ENST00000509995 PENKP01210 267 aaPredicted RBP11.38□□□□□ -0.59
SNF8-207ENST00000509995 DNTTP04053 509 aa11.38□□□□□ -0.59
SNF8-207ENST00000509995 CKMT1AP12532 417 aa11.38□□□□□ -0.59
SNF8-207ENST00000509995 MLLT3P42568 568 aaPredicted RBP11.38□□□□□ -0.59
SNF8-207ENST00000509995 RPS14P62263 151 aaKnown RBP11.38□□□□□ -0.59
SNF8-207ENST00000509995 SRSF6Q13247 344 aaKnown RBP11.38□□□□□ -0.59
SNF8-207ENST00000509995 CLCA4Q14CN2 919 aa11.38□□□□□ -0.59
SNF8-207ENST00000509995 NCEH1Q6PIU2 408 aa11.38□□□□□ -0.59
SNF8-207ENST00000509995 C1orf127Q8N9H9 656 aa11.38□□□□□ -0.59
SNF8-207ENST00000509995 OR4C6Q8NH72 309 aa11.38□□□□□ -0.59
SNF8-207ENST00000509995 SPATA20Q8TB22 786 aa11.38□□□□□ -0.59
SNF8-207ENST00000509995 MYCBPAPQ8TBZ2 947 aa11.38□□□□□ -0.59
SNF8-207ENST00000509995 KBTBD7Q8WVZ9 684 aa11.38□□□□□ -0.59
SNF8-207ENST00000509995 GRAMD1AQ96CP6 724 aa11.38□□□□□ -0.59
SNF8-207ENST00000509995 PIWIL1Q96J94 861 aaKnown RBP11.38□□□□□ -0.59
SNF8-207ENST00000509995 LARP6Q9BRS8 491 aaKnown RBP11.38□□□□□ -0.59
SNF8-207ENST00000509995 CIPCQ9C0C6 399 aa11.38□□□□□ -0.59
SNF8-207ENST00000509995 FBRSQ9HAH7 460 aa11.38□□□□□ -0.59
SNF8-207ENST00000509995 TMPRSS4Q9NRS4 437 aa11.38□□□□□ -0.59
SNF8-207ENST00000509995 CHORDC1Q9UHD1 332 aaPredicted RBP11.38□□□□□ -0.59
SNF8-207ENST00000509995 RP1L1Q8IWN7 2480 aaPredicted RBP11.38□□□□□ -0.59
SNF8-207ENST00000509995 NF1P21359 2839 aa11.37□□□□□ -0.59
SNF8-207ENST00000509995 TLR5O60602 858 aa11.37□□□□□ -0.59
SNF8-207ENST00000509995 ZDHHC11BP0C7U3 371 aa11.37□□□□□ -0.59
SNF8-207ENST00000509995 PLCG1P19174 1290 aa11.37□□□□□ -0.59
SNF8-207ENST00000509995 PSMA5P28066 241 aa11.37□□□□□ -0.59
SNF8-207ENST00000509995 FXR2P51116 673 aaKnown RBP eCLIP11.37□□□□□ -0.59
SNF8-207ENST00000509995 TFAMQ00059 246 aaKnown RBP11.37□□□□□ -0.59
SNF8-207ENST00000509995 POU5F1Q01860 360 aaKnown RBP11.37□□□□□ -0.59
SNF8-207ENST00000509995 KCNJ12Q14500 433 aa11.37□□□□□ -0.59
SNF8-207ENST00000509995 HS1BP3Q53T59 392 aa11.37□□□□□ -0.59
SNF8-207ENST00000509995 SLC45A4Q5BKX6 768 aa11.37□□□□□ -0.59
SNF8-207ENST00000509995 MDH1BQ5I0G3 518 aa11.37□□□□□ -0.59
SNF8-207ENST00000509995 TMEM215Q68D42 235 aa11.37□□□□□ -0.59
SNF8-207ENST00000509995 TMC6Q7Z403 805 aa11.37□□□□□ -0.59
SNF8-207ENST00000509995 KCNK18Q7Z418 384 aa11.37□□□□□ -0.59
SNF8-207ENST00000509995 SPATS2Q86XZ4 545 aaKnown RBP11.37□□□□□ -0.59
SNF8-207ENST00000509995 CCDC83Q8IWF9 413 aa11.37□□□□□ -0.59
SNF8-207ENST00000509995 DIS3L2Q8IYB7 885 aaKnown RBP11.37□□□□□ -0.59
SNF8-207ENST00000509995 NUP93Q8N1F7 819 aa11.37□□□□□ -0.59
SNF8-207ENST00000509995 SLC25A45Q8N413 288 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms