RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 AIPL1Q9NZN9 384 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 CALCOCO1Q9P1Z2 691 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 CAPN11Q9UMQ6 739 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 NENFQ9UMX5 172 aa9.15□□□□□ -0.94
PDLIM5-213ENST00000509357 A0A1W2PQJ5 194 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 TCRBV5S1A1TA0A578 114 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 NEDD8-MDP1E9PL57 170 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 DDX3XO00571 662 aaKnown RBP eCLIP9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 KAT7O95251 611 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 APBB3O95704 486 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 SETSIPP0DME0 302 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 TDGF1P13385 188 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 STAT1P42224 750 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 GRIA2P42262 883 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 DAOAP59103 153 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 COG7P83436 770 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 CDR2Q01850 454 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 PTK2Q05397 1052 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 SRSF5Q13243 272 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 DMC1Q14565 340 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 STILQ15468 1287 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 RAB6CQ53S08 254 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 ARTNQ5T4W7 220 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 KLHDC10Q6PID8 442 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 TPGS1Q6ZTW0 290 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 FAM183BPQ6ZVS7 135 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 HTR3DQ70Z44 454 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 TMEM25Q86YD3 366 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 CCDC33Q8N5R6 958 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 TSTD1Q8NFU3 115 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 SLC30A5Q8TAD4 765 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 CPLX3Q8WVH0 158 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 GOLGA1Q92805 767 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 BHMTQ93088 406 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 XPO6Q96QU8 1125 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 BBS2Q9BXC9 721 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 RAB6CQ9H0N0 254 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 LHX5Q9H2C1 402 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 ARHGAP20Q9P2F6 1191 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 WDR35Q9P2L0 1181 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 DEC1Q9P2X7 70 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 USP18Q9UMW8 372 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 ZNF510Q9Y2H8 683 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 KIAA1549LQ6ZVL6 1849 aa9.14□□□□□ -0.95
PDLIM5-213ENST00000509357 EP300Q09472 2414 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 FAM186AA6NE01 2351 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 CFAP54Q96N23 3096 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 SLC12A8A0AV02 714 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 K7EQS6 105 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 AXIN1O15169 862 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 HOXC11O43248 304 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 HRO43593 1189 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 RPP40O75818 363 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 ALDH1A2O94788 518 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 KLF8O95600 359 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 TPM2P07951 284 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 TFE3P19532 575 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 HOXC13P31276 330 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 TIE1P35590 1138 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 EIF2DP41214 584 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 PRKCIP41743 596 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 DGKEP52429 567 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 ADKP55263 362 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 TPM4P67936 248 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 MRPS21P82921 87 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 MEA1Q16626 185 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 ASTE1Q2TB18 679 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 FILIP1LQ4L180 1135 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 C10orf76Q5T2E6 689 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 NAA35Q5VZE5 725 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 LAIR1Q6GTX8 287 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 GRAMD4Q6IC98 578 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 OLFML1Q6UWY5 402 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 SYT13Q7L8C5 426 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 PHLDB2Q86SQ0 1253 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 TMEM110Q86TL2 294 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 WDR5BQ86VZ2 330 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 C12orf40Q86WS4 652 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 SCUBE3Q8IX30 993 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 CAMKK1Q8N5S9 505 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 TC2NQ8N9U0 490 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 USP33Q8TEY7 942 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 CPA5Q8WXQ8 436 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 EDEM1Q92611 657 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 EZH1Q92800 747 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 FAM81BQ96LP2 452 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 SPAG5Q96R06 1193 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 CHP1Q99653 195 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 DCLK3Q9C098 648 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 MIS12Q9H081 205 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 HAUS4Q9H6D7 363 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 ST7Q9NRC1 585 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 OLA1Q9NTK5 396 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 DNAJC17Q9NVM6 304 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 MARCH2Q9P0N8 246 aa9.13□□□□□ -0.95
PDLIM5-213ENST00000509357 I6L893 689 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 ZBTB24O43167 697 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 MED7O43513 233 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 MFAP3LO75121 409 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 TULP3O75386 442 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms