RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ZNF606Q8WXB4 792 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 KCTD13Q8WZ19 329 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 EDEM1Q92611 657 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 TRMT61BQ9BVS5 477 aaKnown RBP7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 C1QTNF1Q9BXJ1 281 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 UBXN6Q9BZV1 441 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 RAB6CQ9H0N0 254 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 BRD9Q9H8M2 597 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 NLRC4Q9NPP4 1024 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 TRPV5Q9NQA5 729 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 ANLNQ9NQW6 1124 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 COMMD8Q9NX08 183 aa7.56□□□□□ -1.2
TOPBP1-207ENST00000509162 DMXL1Q9Y485 3027 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 SOBPA7XYQ1 873 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 ZNF263O14978 683 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 PRMT3O60678 531 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 STC2O76061 302 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 GFPT2O94808 682 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 GJB6O95452 261 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 ZBED1O96006 694 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 ABL1P00519 1130 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 IGLV3-27P01718 113 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 MMEP08473 750 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 CHRNB1P11230 501 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 LCP1P13796 627 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 HNRNPLP14866 589 aaKnown RBP eCLIP7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 CYP11B1P15538 503 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 AVPR2P30518 371 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 GJA4P35212 333 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 AVPR1AP37288 418 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 MFAP3P55082 362 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 POLR2FP61218 127 aaKnown RBP7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 YWHAEP62258 255 aaKnown RBP7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 NOMO3P69849 1222 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 PTP4A2Q12974 167 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 EIF4EBP2Q13542 120 aaPredicted RBP7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 CCINQ13939 588 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 TAF12Q16514 161 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 HECTD3Q5T447 861 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 MSANTD2Q6P1R3 559 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 OLFML1Q6UWY5 402 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 FAM183BPQ6ZVS7 135 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 ENOSF1Q7L5Y1 443 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 TAC4Q86UU9 113 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 ETFBKMTQ8IXQ9 262 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 SCML4Q8N228 414 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 TTC16Q8NEE8 873 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 PDZD8Q8NEN9 1154 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 TPCN2Q8NHX9 752 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 DQX1Q8TE96 717 aaKnown RBP7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 OSCP1Q8WVF1 389 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 FOXJ1Q92949 421 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 PRICKLE1Q96MT3 831 aaPredicted RBP7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 SLITRK1Q96PX8 696 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 MIS12Q9H081 205 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 XPO7Q9UIA9 1087 aaKnown RBP7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 RASAL2Q9UJF2 1139 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 NAGPAQ9UK23 515 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 FBXL21Q9UKT6 434 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 CLEC4EQ9ULY5 219 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 FANCMQ8IYD8 2048 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 CFAP54Q96N23 3096 aa7.55□□□□□ -1.2
TOPBP1-207ENST00000509162 CACNA1IQ9P0X4 2223 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 TCRBV5S1A1TA0A578 114 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 KANSL1LA0AUZ9 987 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 EGFP01133 1207 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 CYP1A1P04798 512 aaPredicted RBP7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 HMBSP08397 361 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 PFKLP17858 780 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 SOX5P35711 763 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 SLC6A11P48066 632 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 IRAK1P51617 712 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 FANCCQ00597 558 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 PRKCQQ04759 706 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 DMWDQ09019 674 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 EFEMP1Q12805 493 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 RUNX3Q13761 415 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 PON2Q15165 354 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 DHCR24Q15392 516 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 ARHGAP29Q52LW3 1261 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 OXLD1Q5BKU9 147 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 SYPL2Q5VXT5 272 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 BSPRYQ5W0U4 402 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 NADSYN1Q6IA69 706 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 KLHDC10Q6PID8 442 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 RHBDF2Q6PJF5 856 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 TMEM110Q86TL2 294 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 GAS2L3Q86XJ1 694 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 MIB1Q86YT6 1006 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 FAM217AQ8IXS0 508 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 WFDC5Q8TCV5 224 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 CLDN23Q96B33 292 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 MRRFQ96E11 262 aaKnown RBP7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 FCRL2Q96LA5 508 aaPredicted RBP7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 SLC2A13Q96QE2 648 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 FBXO44Q9H4M3 255 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 ECT2Q9H8V3 914 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 ZDHHC4Q9NPG8 344 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 PRMT8Q9NR22 394 aaPredicted RBP7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 FAM86C1Q9NVL1 165 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms