RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 ERMARDQ5T6L9 678 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 SH3PXD2AQ5TCZ1 1133 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 CCDC181Q5TID7 509 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 NUGGCQ68CJ6 796 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 FAM131BQ86XD5 332 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 MAIP1Q8WWC4 291 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 SMG7Q92540 1137 aaKnown RBP10.79□□□□□ -0.68
RFC1-211ENST00000509084 ALG3Q92685 438 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 RNF34Q969K3 372 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 PLD4Q96BZ4 506 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 GAS2L1Q99501 681 aaPredicted RBP10.79□□□□□ -0.68
RFC1-211ENST00000509084 SNRNP25Q9BV90 132 aaKnown RBP10.79□□□□□ -0.68
RFC1-211ENST00000509084 ATXN3LQ9H3M9 355 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 WDCPQ9H6R7 721 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 ZWILCHQ9H900 591 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 PIDD1Q9HB75 910 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 WDR6Q9NNW5 1121 aaKnown RBP10.79□□□□□ -0.68
RFC1-211ENST00000509084 PIGVQ9NUD9 493 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 RCOR3Q9P2K3 495 aaPredicted RBP10.79□□□□□ -0.68
RFC1-211ENST00000509084 PCSK1NQ9UHG2 260 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 SLC12A6Q9UHW9 1150 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 TTC7AQ9ULT0 858 aaPredicted RBP10.79□□□□□ -0.68
RFC1-211ENST00000509084 FZD10Q9ULW2 581 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 AP4E1Q9UPM8 1137 aa10.79□□□□□ -0.68
RFC1-211ENST00000509084 OBSL1O75147 1896 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 SYNJ2BP-COX16A0A087WUM0 186 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 TRAV19A0A0A6YYK7 116 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 SLC12A8A0AV02 714 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 LRRD1A4D1F6 860 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 PGRMC1O00264 195 aaKnown RBP10.78□□□□□ -0.68
RFC1-211ENST00000509084 COCHO43405 550 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 RHOP08100 348 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 RARAP10276 462 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 IL1R2P27930 398 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 HTR7P34969 479 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 PTPN7P35236 360 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 ADRA1BP35368 520 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 MARCKSL1P49006 195 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 PGFP49763 221 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 TBX4P57082 545 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 KRT81Q14533 505 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 DPYSL2Q16555 572 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 SMTNL2Q2TAL5 461 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 DAB2IPQ5VWQ8 1189 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 DDX42Q86XP3 938 aaKnown RBP eCLIP10.78□□□□□ -0.68
RFC1-211ENST00000509084 CPNE8Q86YQ8 564 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 CCDC50Q8IVM0 306 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 UNC45BQ8IWX7 931 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 RASGEF1CQ8N431 466 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 ATP6V0D2Q8N8Y2 350 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 KCTD6Q8NC69 237 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 ADAM32Q8TC27 787 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 ACTRT1Q8TDG2 376 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 HSPH1Q92598 858 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 ZNF707Q96C28 371 aaPredicted RBP10.78□□□□□ -0.68
RFC1-211ENST00000509084 SLC39A13Q96H72 371 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 PEBP4Q96S96 227 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 PSMB7Q99436 277 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 ZNF670Q9BS34 389 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 ADAM33Q9BZ11 813 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 PRDM12Q9H4Q4 367 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 CCSER2Q9H7U1 834 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 PRDM16Q9HAZ2 1276 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 TRPC7Q9HCX4 862 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 RRAGDQ9NQL2 400 aaPredicted RBP10.78□□□□□ -0.68
RFC1-211ENST00000509084 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.78□□□□□ -0.68
RFC1-211ENST00000509084 ARHGEF38Q9NXL2 777 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 COX16Q9P0S2 106 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 SFMBT1Q9UHJ3 866 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 EFR3BQ9Y2G0 817 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 MRFAP1Q9Y605 127 aa10.78□□□□□ -0.68
RFC1-211ENST00000509084 A0A1W2PRU2 124 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 H3BRJ5 948 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 CEP104O60308 925 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 LATS1O95835 1130 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 IGLV3-27P01718 113 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 CKMP06732 381 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 MBL2P11226 248 aaPredicted RBP10.77□□□□□ -0.69
RFC1-211ENST00000509084 TCF4P15884 667 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 CXCR5P32302 372 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 ARL4AP40617 200 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 ATXN1P54253 815 aaKnown RBP10.77□□□□□ -0.69
RFC1-211ENST00000509084 EMP3P54852 163 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 CDH6P55285 790 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 SLC7A9P82251 487 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 ITIH3Q06033 890 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 TFDP3Q5H9I0 405 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 DCAF12L1Q5VU92 463 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 GPR153Q6NV75 609 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 ANKRD54Q6NXT1 300 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 CYP4V2Q6ZWL3 525 aaPredicted RBP10.77□□□□□ -0.69
RFC1-211ENST00000509084 GAREM2Q75VX8 874 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 TMEM150AQ86TG1 271 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 MIB1Q86YT6 1006 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 CCDC185Q8N715 623 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 CEP112Q8N8E3 955 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 MNS1Q8NEH6 495 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 VN1R2Q8NFZ6 395 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 FAM71BQ8TC56 605 aa10.77□□□□□ -0.69
RFC1-211ENST00000509084 MARVELD3Q96A59 401 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms