RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 RAD54BQ9Y620 910 aa15.47■□□□□ 0.07
UBE2D3-228ENST00000508974 PES1O00541 588 aaKnown RBP15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 LRP3O75074 770 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 PENKP01210 267 aaPredicted RBP15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 LTFP02788 710 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 CYBBP04839 570 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 CISD3P0C7P0 127 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 NTSR1P30989 418 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 MPLP40238 635 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 HARS2P49590 506 aaKnown RBP15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 CLCN6P51797 869 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 CREB5Q02930 508 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 PUM1Q14671 1186 aaKnown RBP eCLIP15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 TRIP4Q15650 581 aaPredicted RBP15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 EXOC3L4Q17RC7 722 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 GEN1Q17RS7 908 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 HSF5Q4G112 596 aaPredicted RBP15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 AASDHQ4L235 1098 aaPredicted RBP15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 TRMT11Q7Z4G4 463 aaKnown RBP15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 SCUBE3Q8IX30 993 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 FAM149B1Q96BN6 582 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 ZC3H10Q96K80 434 aaKnown RBP15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 LMBRD1Q9NUN5 540 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 CACNA2D2Q9NY47 1150 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 APEX2Q9UBZ4 518 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 AJAP1Q9UKB5 411 aaPredicted RBP15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 CLEC4EQ9ULY5 219 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 HBS1LQ9Y450 684 aaKnown RBP15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 PLXND1Q9Y4D7 1925 aa15.46■□□□□ 0.07
UBE2D3-228ENST00000508974 TNRC6BQ9UPQ9 1833 aaKnown RBP15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 BECN2A8MW95 431 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 PRR5-ARHGAP8B1AHC4 643 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 WASH3PC4AMC7 463 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 MED7O43513 233 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 RHOBTB1O94844 696 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 PNMA6AP0CW24 399 aaPredicted RBP15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 NCAM1P13591 858 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 PRKCSHP14314 528 aaPredicted RBP15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 PON1P27169 355 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 GPD2P43304 727 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 ARHGAP8P85298 464 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 TCEAL6Q6IPX3 200 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 SDE2Q6IQ49 451 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 KIAA1211LQ6NV74 962 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 ARMCX6Q7L4S7 300 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 PASD1Q8IV76 773 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 SCML4Q8N228 414 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 C12orf50Q8NA57 414 aaPredicted RBP15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 ADAM32Q8TC27 787 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 IRGQQ8WZA9 623 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 TCEAL3Q969E4 200 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 HSFY1Q96LI6 401 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 SLC6A17Q9H1V8 727 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 THAP9Q9H5L6 903 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 DLL3Q9NYJ7 618 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 DACH1Q9UI36 760 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 CYTH4Q9UIA0 394 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 CNTN6Q9UQ52 1028 aa15.45■□□□□ 0.06
UBE2D3-228ENST00000508974 FAM170AA1A519 330 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 DCDC2BA2VCK2 349 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 MAP3K13O43283 966 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 FBXO21O94952 628 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 GABRG2P18507 467 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 DHPSP49366 369 aaPredicted RBP15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 SGSHP51688 502 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 ATXN1P54253 815 aaKnown RBP15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 MAN2A1Q16706 1144 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 ENOSF1Q7L5Y1 443 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 FAM114A1Q8IWE2 563 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 CPXM2Q8N436 756 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 OLIG1Q8TAK6 271 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 ZNF606Q8WXB4 792 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 LOXL4Q96JB6 756 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 SPACA7Q96KW9 195 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 RXFP3Q9NSD7 469 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 TJP2Q9UDY2 1190 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 NAALADL1Q9UQQ1 740 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 STARD13Q9Y3M8 1113 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 LAMA1P25391 3075 aa15.44■□□□□ 0.06
UBE2D3-228ENST00000508974 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 GOLGA6L7A0A1B0GV03 622 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 A0A1W2PQF6 199 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 E5RJQ4 531 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 P2RY2P41231 377 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 TBX4P57082 545 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 MPPE1Q53F39 396 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 PMS2CLQ68D20 193 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 MSANTD2Q6P1R3 559 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 RFWD3Q6PCD5 774 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 ERMP1Q7Z2K6 904 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 ANKS1BQ7Z6G8 1248 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 FAM217AQ8IXS0 508 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 TMEFF1Q8IYR6 380 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 DEFB119Q8N690 84 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 KCNV2Q8TDN2 545 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 DQX1Q8TE96 717 aaKnown RBP15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 IPO4Q8TEX9 1081 aaKnown RBP15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 SORCS1Q8WY21 1168 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 TUBGCP2Q9BSJ2 902 aa15.43■□□□□ 0.06
UBE2D3-228ENST00000508974 CIPCQ9C0C6 399 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms