RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 MLH1P40692 756 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 STAT5BP51692 787 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 ARFIP2P53365 341 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 IFI35P80217 286 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 FOXC1Q12948 553 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 THOC5Q13769 683 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 ERV3-1Q14264 604 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 C3orf38Q5JPI3 329 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TSSK4Q6SA08 328 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 SASS6Q6UVJ0 657 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 C1orf122Q6ZSJ8 110 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 RASGRP3Q8IV61 690 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 DENND6BQ8NEG7 585 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 PLPPR2Q96GM1 343 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 ZFRQ96KR1 1074 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 MTMR9Q96QG7 549 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 CITED1Q99966 193 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 SPXQ9BT56 116 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 WDR18Q9BV38 432 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 OPA3Q9H6K4 179 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 KCNK9Q9NPC2 374 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 NGBQ9NPG2 151 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 MALT1Q9UDY8 824 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 WARS2Q9UGM6 360 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 PADI4Q9UM07 663 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 A0A1B0GUL7 405 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 RGSL1A5PLK6 1076 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TK2O00142 265 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF185O15231 689 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 PRPSAP2O60256 369 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 SNRNP70P08621 437 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 CCDC130P13994 396 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 PRLRP16471 622 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 LPOP22079 712 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 NMT1P30419 496 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TNNC1P63316 161 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 MRPS5P82675 430 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 DUSP4Q13115 394 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 LRRC32Q14392 662 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 NFIXQ14938 502 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 MEA1Q16626 185 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 SUSD4Q5VX71 490 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 CPZQ66K79 652 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 CES5AQ6NT32 575 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 WASF1Q92558 559 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 APOPT1Q96IL0 206 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 HNRNPABQ99729 332 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 UQCC2Q9BRT2 126 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 LLPHQ9BRT6 129 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 MS4A7Q9GZW8 240 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 COG4Q9H9E3 785 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 DNAJC17Q9NVM6 304 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 NMRK1Q9NWW6 199 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 GIMAP2Q9UG22 337 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 RCOR1Q9UKL0 485 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TDRKHQ9Y2W6 561 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 PTRH2Q9Y3E5 179 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 CYP46A1Q9Y6A2 500 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF804BA4D1E1 1349 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 PNPLA7Q6ZV29 1317 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 GREB1LQ9C091 1923 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TBC1D3DA0A087WVF3 549 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TBC1D3IA0A087WXS9 549 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TBC1D3EA0A087X179 549 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TBC1D3KA0A087X1G2 549 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TBC1D3BA6NDS4 549 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TBC1D3FA6NER0 549 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 SMIM23A6NLE4 172 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TBC1D3LB9A6J9 549 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 SLC27A2O14975 620 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 PLSCR1O15162 318 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 EIF3DO15371 548 aaKnown RBP eCLIP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 KLK10O43240 276 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 EXTL3O43909 919 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 PCDH8O95206 1070 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TBC1D3HP0C7X1 549 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TPBGLP0DKB5 382 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 CALB2P22676 271 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 CHRNA3P32297 505 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF75DP51815 510 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 RBM6P78332 1123 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TBC1D25Q3MII6 688 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 UGT3A2Q3SY77 523 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TBC1D3GQ6DHY5 549 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 THOC7Q6I9Y2 204 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TBC1D3CQ6IPX1 549 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 CHRDL2Q6WN34 429 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 RIOX2Q8IUF8 465 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TBC1D3Q8IZP1 549 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 PHTF2Q8N3S3 785 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 KDM1BQ8NB78 822 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 BCL7CQ8WUZ0 217 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 REXO5Q96IC2 774 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 MIPEPQ99797 713 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TMEM165Q9HC07 324 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 HCFC1R1Q9NWW0 138 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 FETUBQ9UGM5 382 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 LAMP5Q9UJQ1 280 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 MTMR6Q9Y217 621 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms