RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 STX17P56962 302 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 OSTNP61366 133 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 UBE3AQ05086 875 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 DSC1Q08554 894 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 CETN1Q12798 172 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 ELAVL2Q12926 359 aaKnown RBP5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 BFSP1Q12934 665 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 TMEM132DQ14C87 1099 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 ZBTB6Q15916 424 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 CCDC40Q4G0X9 1142 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 ANO6Q4KMQ2 910 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 ACBD5Q5T8D3 534 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 DCLRE1AQ6PJP8 1040 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 JAMLQ86YT9 394 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 CBWD2Q8IUF1 395 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 COLGALT2Q8IYK4 626 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 GPR65Q8IYL9 337 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 TMEM145Q8NBT3 493 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 LPPQ93052 612 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 SAAL1Q96ER3 474 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 BORCS6Q96GS4 357 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 ZNF558Q96NG5 402 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 PPP1R10Q96QC0 940 aaKnown RBP5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 COLEC11Q9BWP8 271 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 EPB41L4BQ9H329 900 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 TSPY26PQ9H489 355 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 FAM124BQ9H5Z6 455 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 GOLGA2P5Q9HBQ8 144 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 GCM1Q9NP62 436 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 TNFRSF12AQ9NP84 129 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 TBC1D13Q9NVG8 400 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 INTS13Q9NVM9 706 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 ITGA11Q9UKX5 1188 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 NFE2L3Q9Y4A8 694 aa5.89□□□□□ -1.47
HMGB1P44-201ENST00000508597 NLRC5Q86WI3 1866 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 GBF1Q92538 1859 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 GTPBP10A4D1E9 387 aaKnown RBP5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 C5orf67F2Z3F1 127 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 GOLGA6L19H0YKK7 550 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 PPP1R12AO14974 1030 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 TRAPPC3O43617 180 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 POMCP01189 267 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 TMEM191BP0C7N4 346 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 C1QTNF9P0C862 333 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 DLATP10515 647 aaKnown RBP5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 ATICP31939 592 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 VIPR1P32241 457 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 BMPR1AP36894 532 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 CASP4P49662 377 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 SCNN1GP51170 649 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 GYS2P54840 703 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 ERVFRD-1P60508 538 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 ERVK-21P61565 698 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 RBP5P82980 135 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 KRT17Q04695 432 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 MYO1EQ12965 1108 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 NAB2Q15742 525 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 ZACNQ401N2 412 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 ZBTB41Q5SVQ8 909 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 SPOUT1Q5T280 376 aaKnown RBP5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 RNF187Q5TA31 235 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 KRT39Q6A163 491 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 JADE1Q6IE81 842 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 PDXDC1Q6P996 788 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 CYP2R1Q6VVX0 501 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 IRF2BP1Q8IU81 584 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 CILP2Q8IUL8 1156 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 LRRC52Q8N7C0 313 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 CCDC150Q8NCX0 1101 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 SPATA18Q8TC71 538 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 TAF4BQ92750 862 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 NINJ1Q92982 152 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 FAM84AQ96KN4 292 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 FAM81BQ96LP2 452 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 ZNF560Q96MR9 790 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 TGS1Q96RS0 853 aaKnown RBP5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 IKZF4Q9H2S9 585 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 CWH43Q9H720 699 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 NRDE2Q9H7Z3 1164 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 SLC28A3Q9HAS3 691 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 TMEM8AQ9HCN3 771 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 PDE11AQ9HCR9 933 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 MIOSQ9NXC5 875 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 SFMBT1Q9UHJ3 866 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 PUF60Q9UHX1 559 aaKnown RBP5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 FBXL7Q9UJT9 491 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 LZTS1Q9Y250 596 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 SSX2IPQ9Y2D8 614 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 FAN1Q9Y2M0 1017 aa5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.88□□□□□ -1.47
HMGB1P44-201ENST00000508597 SCN1AP35498 2009 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 ANO9A1A5B4 782 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 LINC01553A4QN01 128 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 LRRIQ3A6PVS8 624 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 NUDT19A8MXV4 375 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 KCNJ18B7U540 433 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 ETV2O00321 342 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 PODXLO00592 558 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 PIRO00625 290 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 MEFVO15553 781 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms