RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 SOBPA7XYQ1 873 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 MIF4GDA9UHW6 222 aaKnown RBP11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 LRCH4O75427 683 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 TUBB4AP04350 444 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 SLC11A2P49281 568 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 HDAC4P56524 1084 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 ZNF252P-AS1Q0IIN9 211 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 MTA1Q13330 715 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 NNTQ13423 1086 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 KRT81Q14533 505 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 CBX2Q14781 532 aaPredicted RBP11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 BOLA3Q53S33 107 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 PRSS36Q5K4E3 855 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 BRMS1LQ5PSV4 323 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 DNTTIP2Q5QJE6 756 aaKnown RBP11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 STXBP5Q5T5C0 1151 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 DAB2IPQ5VWQ8 1189 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 NUGGCQ68CJ6 796 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 SLFN11Q7Z7L1 901 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 LRRC57Q8N9N7 239 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 CENPIQ92674 756 aaPredicted RBP11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 NT5C3BQ969T7 300 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 PLD4Q96BZ4 506 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 PGAP3Q96FM1 320 aaPredicted RBP11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 NAPGQ99747 312 aaPredicted RBP11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 SLC46A2Q9BY10 475 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 S1PR5Q9H228 398 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 PIGVQ9NUD9 493 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 DDX56Q9NY93 547 aaKnown RBP11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 DNAI1Q9UI46 699 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 JRKLQ9Y4A0 524 aa11.46□□□□□ -0.57
BRCC3P1-201ENST00000508559 ZNF638Q14966 1978 aaKnown RBP11.46□□□□□ -0.58
BRCC3P1-201ENST00000508559 GREB1Q4ZG55 1949 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 CCDC66A2RUB6 948 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 PSTPIP1O43586 416 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 ENDOD1O94919 500 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 KRT1P04264 644 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 LTBRP36941 435 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 CXCR3P49682 368 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 ATXN1P54253 815 aaKnown RBP11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 ETF1P62495 437 aaKnown RBP11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 SLC7A9P82251 487 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 RING1Q06587 406 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 PPP2R5DQ14738 602 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 SMTNL2Q2TAL5 461 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 ERMARDQ5T6L9 678 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 SYT10Q6XYQ8 523 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 NT5DC3Q86UY8 548 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 CPNE8Q86YQ8 564 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 CCDC50Q8IVM0 306 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 MAP7D3Q8IWC1 876 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 KCTD6Q8NC69 237 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 SMRP1Q8NCR6 262 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 ZSCAN18Q8TBC5 510 aaPredicted RBP11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 ACSF2Q96CM8 615 aaPredicted RBP11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 MSLNLQ96KJ4 702 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 SLC22A12Q96S37 553 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 DDX50Q9BQ39 737 aaKnown RBP11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 KLF16Q9BXK1 252 aaPredicted RBP11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 RNF38Q9H0F5 515 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 TKTL2Q9H0I9 626 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 SIK2Q9H0K1 926 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 DHX35Q9H5Z1 703 aaKnown RBP11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 GKN1Q9NS71 199 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 TDP1Q9NUW8 608 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 GDE1Q9NZC3 331 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 CFAP97Q9P2B7 532 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 CDH22Q9UJ99 828 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 CDH7Q9ULB5 785 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 PACSIN2Q9UNF0 486 aaPredicted RBP11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 AP4E1Q9UPM8 1137 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 FAM50BQ9Y247 325 aa11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 USP15Q9Y4E8 981 aaPredicted RBP11.45□□□□□ -0.58
BRCC3P1-201ENST00000508559 KCNK3O14649 394 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 ENC1O14682 589 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 DAPK3O43293 454 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 MOSPD3O75425 235 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 PAPLNO95428 1278 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 IGLV3-25P01717 112 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 CORO1AP31146 461 aaKnown RBP11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 ADRA1BP35368 520 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 KCNQ1P51787 676 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 AIF1P55008 147 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 RWDD2BP57060 319 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 TAS2R40P59535 323 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 SMAD4Q13485 552 aaKnown RBP11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 COL19A1Q14993 1142 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 RAB6CQ53S08 254 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 PPP6R3Q5H9R7 873 aaPredicted RBP11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 KCNT1Q5JUK3 1230 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 MEI1Q5TIA1 1274 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 LRRC38Q5VT99 294 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 LRRC31Q6UY01 552 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 OTOP3Q7RTS5 596 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 POLNQ7Z5Q5 900 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 ARID3BQ8IVW6 561 aaPredicted RBP11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 NPAS3Q8IXF0 933 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 YAF2Q8IY57 180 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 CCDC185Q8N715 623 aa11.44□□□□□ -0.58
BRCC3P1-201ENST00000508559 MAFAQ8NHW3 353 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms