RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 SH2D3AQ9BRG2 576 aa5.9□□□□□ -1.46
GYPA-205ENST00000508337 POLR3GLQ9BT43 218 aa5.9□□□□□ -1.46
GYPA-205ENST00000508337 CRB3Q9BUF7 120 aa5.9□□□□□ -1.46
GYPA-205ENST00000508337 VPS45Q9NRW7 570 aa5.9□□□□□ -1.46
GYPA-205ENST00000508337 ABHD10Q9NUJ1 306 aa5.9□□□□□ -1.46
GYPA-205ENST00000508337 LRFN1Q9P244 771 aa5.9□□□□□ -1.46
GYPA-205ENST00000508337 FZD4Q9ULV1 537 aa5.9□□□□□ -1.46
GYPA-205ENST00000508337 NFU1Q9UMS0 254 aa5.9□□□□□ -1.46
GYPA-205ENST00000508337 WDR17Q8IZU2 1322 aa5.9□□□□□ -1.47
GYPA-205ENST00000508337 ABHD14A-ACY1A0A1B0GW23 586 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 TCRBV5S1A1TA0A578 114 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 AQP12BA6NM10 295 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 ALADP13716 330 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 NPPBP16860 134 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 KELP23276 732 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 SERPINB3P29508 390 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 PLCD1P51178 756 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 SLC14A1Q13336 389 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 BLMHQ13867 455 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 GLE1Q53GS7 698 aaKnown RBP5.89□□□□□ -1.47
GYPA-205ENST00000508337 CEP78Q5JTW2 689 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 SLC18B1Q6NT16 456 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 C8orf58Q8NAV2 365 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 OR52L2PQ8NGH6 319 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 POF1BQ8WVV4 589 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 SLC29A3Q9BZD2 475 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 DTNAQ9Y4J8 743 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 COMMD10Q9Y6G5 202 aa5.89□□□□□ -1.47
GYPA-205ENST00000508337 A0A087WV62 115 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 OR2W5A6NFC9 320 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 KCNU1A8MYU2 1149 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 H3BNC9 293 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 FCHO1O14526 889 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 NPC1O15118 1278 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 INPPL1O15357 1258 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 PRR35P0CG20 571 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 DUSP1P28562 367 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 MMP13P45452 471 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 PUM3Q15397 648 aaKnown RBP5.88□□□□□ -1.47
GYPA-205ENST00000508337 MTX3Q5HYI7 312 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 ZNF569Q5MCW4 686 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 ATPAF1Q5TC12 328 aaPredicted RBP5.88□□□□□ -1.47
GYPA-205ENST00000508337 ZNF813Q6ZN06 617 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 ZNF66Q6ZN08 573 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 GALNT16Q8N428 558 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 ENAHQ8N8S7 591 aaPredicted RBP5.88□□□□□ -1.47
GYPA-205ENST00000508337 SENP7Q9BQF6 1050 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 ASNSD1Q9NWL6 643 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 SLC8A2Q9UPR5 921 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 PCDHB7Q9Y5E2 793 aa5.88□□□□□ -1.47
GYPA-205ENST00000508337 PCDH17O14917 1159 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 ITGA2BP08514 1039 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 ITGA5P08648 1049 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 THBS4P35443 961 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 TRIM14Q14142 442 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 SPARCL1Q14515 664 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 FAM110CQ1W6H9 321 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 ZKSCAN2Q63HK3 967 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 FAM90A2PQ658T7 463 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 KLHL17Q6TDP4 642 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 NEK8Q86SG6 692 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 SRRM1Q8IYB3 904 aaKnown RBP5.87□□□□□ -1.47
GYPA-205ENST00000508337 SPICE1Q8N0Z3 855 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 ATG16L2Q8NAA4 619 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 FAM71BQ8TC56 605 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 PIGKQ92643 395 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 PRR11Q96HE9 360 aaPredicted RBP5.87□□□□□ -1.47
GYPA-205ENST00000508337 REXO5Q96IC2 774 aaKnown RBP5.87□□□□□ -1.47
GYPA-205ENST00000508337 GDF15Q99988 308 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 WDR12Q9GZL7 423 aaKnown RBP5.87□□□□□ -1.47
GYPA-205ENST00000508337 BRD8Q9H0E9 1235 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 CCDC134Q9H6E4 229 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 PRDM16Q9HAZ2 1276 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 OBP2BQ9NPH6 170 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 TAGLN3Q9UI15 199 aa5.87□□□□□ -1.47
GYPA-205ENST00000508337 IPO11Q9UI26 975 aaKnown RBP5.87□□□□□ -1.47
GYPA-205ENST00000508337 CCDC187A0A096LP49 1063 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 CTIFO43310 598 aaKnown RBP5.86□□□□□ -1.47
GYPA-205ENST00000508337 ANXA6P08133 673 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 CELA2AP08217 269 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 CD63P08962 238 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 NDUFS1P28331 727 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 MORC3Q14149 939 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 RPS6KA2Q15349 733 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 PDCD2Q16342 344 aaPredicted RBP5.86□□□□□ -1.47
GYPA-205ENST00000508337 ZACNQ401N2 412 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 CCDC38Q502W7 563 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 WDR93Q6P2C0 686 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 ACSM6Q6P461 480 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 SLC2A7Q6PXP3 512 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 PIK3AP1Q6ZUJ8 805 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 CCDC117Q8IWD4 279 aaPredicted RBP5.86□□□□□ -1.47
GYPA-205ENST00000508337 SRFBP1Q8NEF9 429 aaKnown RBP5.86□□□□□ -1.47
GYPA-205ENST00000508337 DENND1AQ8TEH3 1009 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 NTN5Q8WTR8 489 aaPredicted RBP5.86□□□□□ -1.47
GYPA-205ENST00000508337 SLC22A17Q8WUG5 538 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 KAT2BQ92831 832 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 RPS6KC1Q96S38 1066 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 CDCP1Q9H5V8 836 aa5.86□□□□□ -1.47
GYPA-205ENST00000508337 SLC52A1Q9NWF4 448 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms