RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 C2CD4BA6NLJ0 364 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 TNFRSF10AO00220 468 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 TULP2O00295 520 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 STC2O76061 302 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 TRUB2O95900 331 aaKnown RBP8.81□□□□□ -1
PDGFC-205ENST00000506880 ABL1P00519 1130 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 CYBBP04839 570 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 CYP1A2P05177 515 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 TMEM253P0C7T8 217 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 PNMA6AP0CW24 399 aaPredicted RBP8.81□□□□□ -1
PDGFC-205ENST00000506880 ABCB4P21439 1286 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 MAN1A1P33908 653 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 RDXP35241 583 aaKnown RBP8.81□□□□□ -1
PDGFC-205ENST00000506880 PCK1P35558 622 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 CXCR3P49682 368 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 RGS7P49802 495 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 STARD6P59095 220 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 ZXDAP98168 799 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 SCAPQ12770 1279 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 SLC12A1Q13621 1099 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 DCAF6Q58WW2 860 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 PPP1R15BQ5SWA1 713 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 TAF3Q5VWG9 929 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 TANGO2Q6ICL3 276 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 DCUN1D2Q6PH85 259 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 PARM1Q6UWI2 310 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 FAM183BPQ6ZVS7 135 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 DQX1Q8TE96 717 aaKnown RBP8.81□□□□□ -1
PDGFC-205ENST00000506880 SLC20A1Q8WUM9 679 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 CPA5Q8WXQ8 436 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 ING5Q8WYH8 240 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 FGF14Q92915 247 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 PRRX2Q99811 253 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 APOL5Q9BWW9 433 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 C1QTNF1Q9BXJ1 281 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 RNF38Q9H0F5 515 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 KCNH6Q9H252 994 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 CCSER2Q9H7U1 834 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 NMUR1Q9HB89 426 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 ACP6Q9NPH0 428 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 SEPT11Q9NVA2 429 aaKnown RBP8.81□□□□□ -1
PDGFC-205ENST00000506880 DUS2Q9NX74 493 aaKnown RBP8.81□□□□□ -1
PDGFC-205ENST00000506880 IP6K2Q9UHH9 426 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 MIA3Q5JRA6 1907 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 CHD5Q8TDI0 1954 aa8.81□□□□□ -1
PDGFC-205ENST00000506880 A0A0A0MRY4 1105 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 KCNU1A8MYU2 1149 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 ZNF487B1APH4 448 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 ARHGAP6O43182 974 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 TIMM44O43615 452 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 ZNF189O75820 626 aaPredicted RBP8.8□□□□□ -1
PDGFC-205ENST00000506880 RNF8O76064 485 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 FYNP06241 537 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 PDGFRAP16234 1089 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 DRD1P21728 446 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 ETFBP38117 255 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 EIF4A3P38919 411 aaKnown RBP8.8□□□□□ -1
PDGFC-205ENST00000506880 SLC1A1P43005 524 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 VASPP50552 380 aaPredicted RBP8.8□□□□□ -1
PDGFC-205ENST00000506880 CLCN5P51795 746 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 TBX4P57082 545 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 GAD2Q05329 585 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 IFRD2Q12894 506 aaPredicted RBP8.8□□□□□ -1
PDGFC-205ENST00000506880 MAMLD1Q13495 774 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 RUNX3Q13761 415 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 DMC1Q14565 340 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 GSE1Q14687 1217 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 EML3Q32P44 896 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 C5orf22Q49AR2 442 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 MPPE1Q53F39 396 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 DGKKQ5KSL6 1271 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 CCDC122Q5T0U0 273 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 E4F1Q66K89 784 aaPredicted RBP8.8□□□□□ -1
PDGFC-205ENST00000506880 ZNF783Q6ZMS7 281 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 MMS22LQ6ZRQ5 1243 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 PASD1Q8IV76 773 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 CCDC117Q8IWD4 279 aaPredicted RBP8.8□□□□□ -1
PDGFC-205ENST00000506880 ADGRG2Q8IZP9 1017 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 OLIG1Q8TAK6 271 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 FEZF2Q8TBJ5 459 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 CPLX3Q8WVH0 158 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 RFFLQ8WZ73 363 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 KHSRPQ92945 711 aaKnown RBP eCLIP8.8□□□□□ -1
PDGFC-205ENST00000506880 ZSWIM3Q96MP5 696 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 XPO6Q96QU8 1125 aaKnown RBP8.8□□□□□ -1
PDGFC-205ENST00000506880 PCDHB18PQ96TA0 734 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 BAG1Q99933 345 aaPredicted RBP8.8□□□□□ -1
PDGFC-205ENST00000506880 C11orf70Q9BRQ4 267 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.8□□□□□ -1
PDGFC-205ENST00000506880 TSGA10Q9BZW7 698 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 OSBPL2Q9H1P3 480 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 OSER1Q9NX31 292 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 ARHGEF38Q9NXL2 777 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 PPARGC1AQ9UBK2 798 aaKnown RBP8.8□□□□□ -1
PDGFC-205ENST00000506880 SLC27A6Q9Y2P4 619 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 MYO18AQ92614 2054 aaKnown RBP8.8□□□□□ -1
PDGFC-205ENST00000506880 TICRRQ7Z2Z1 1910 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 KIAA1549LQ6ZVL6 1849 aa8.8□□□□□ -1
PDGFC-205ENST00000506880 MYOFQ9NZM1 2061 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 A0A087X0T9 212 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms