RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 MUC3AQ02505 3323 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 M0QYT0 321 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 F9P00740 461 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 HMBSP08397 361 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 IRF1P10914 325 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 GPD1P21695 349 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 SDC4P31431 198 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 MAGEA1P43355 309 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 SULT1E1P49888 294 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 ZNF143P52747 638 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-210ENST00000506767 TCEAL1Q15170 157 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 DCUN1D2Q6PH85 259 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 CCDC112Q8NEF3 446 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 FNIP1Q8TF40 1166 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 OSCP1Q8WVF1 389 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 CTNNBL1Q8WYA6 563 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-210ENST00000506767 AZIN2Q96A70 460 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 OTUB2Q96DC9 234 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 ASIC4Q96FT7 647 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 DCLK3Q9C098 648 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 LINC00597Q9H2U6 94 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 TRPV5Q9NQA5 729 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 SLC2A4RGQ9NR83 387 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 PIGVQ9NUD9 493 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 THG1LQ9NWX6 298 aaKnown RBP13.37□□□□□ -0.27
TCOF1-210ENST00000506767 DDIT4Q9NX09 232 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 TBC1D14Q9P2M4 693 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 STOML2Q9UJZ1 356 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 REXO2Q9Y3B8 237 aaKnown RBP13.37□□□□□ -0.27
TCOF1-210ENST00000506767 PCDHA13Q9Y5I0 950 aa13.37□□□□□ -0.27
TCOF1-210ENST00000506767 COL4A2P08572 1712 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 KCNU1A8MYU2 1149 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 SLC9A3R1O14745 358 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-210ENST00000506767 NARSO43776 548 aaKnown RBP13.36□□□□□ -0.27
TCOF1-210ENST00000506767 LATS1O95835 1130 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 SRFP11831 508 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 CORO1AP31146 461 aaKnown RBP13.36□□□□□ -0.27
TCOF1-210ENST00000506767 GDI1P31150 447 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 CXCR3P49682 368 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 CCZ1BP86790 482 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 CCZ1P86791 482 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-210ENST00000506767 ZNF252P-AS1Q0IIN9 211 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 PPP2R5DQ14738 602 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 SPA17Q15506 151 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 C15orf59Q2T9L4 293 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-210ENST00000506767 EML3Q32P44 896 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 SH3PXD2AQ5TCZ1 1133 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 NUGGCQ68CJ6 796 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 CC2D1AQ6P1N0 951 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-210ENST00000506767 STRADAQ7RTN6 431 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 UNC45BQ8IWX7 931 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 BBS7Q8IWZ6 715 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 FAM217AQ8IXS0 508 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 YAF2Q8IY57 180 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 ADGRG2Q8IZP9 1017 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 ZFYVE19Q96K21 471 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 CNPY3Q9BT09 278 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 NUP85Q9BW27 656 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 TRIM7Q9C029 511 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 FAM204AQ9H8W3 233 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.36□□□□□ -0.27
TCOF1-210ENST00000506767 DUS2Q9NX74 493 aaKnown RBP13.36□□□□□ -0.27
TCOF1-210ENST00000506767 UVRAGQ9P2Y5 699 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 LSM7Q9UK45 103 aaKnown RBP13.36□□□□□ -0.27
TCOF1-210ENST00000506767 AGO1Q9UL18 857 aaKnown RBP13.36□□□□□ -0.27
TCOF1-210ENST00000506767 DUSP12Q9UNI6 340 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 ZNF510Q9Y2H8 683 aa13.36□□□□□ -0.27
TCOF1-210ENST00000506767 ARHGAP6O43182 974 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 CCP110O43303 1012 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 MTA2O94776 668 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 SLC2A3P11169 496 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 CCR1P32246 355 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 RDXP35241 583 aaKnown RBP13.35□□□□□ -0.27
TCOF1-210ENST00000506767 HARS2P49590 506 aaKnown RBP13.35□□□□□ -0.27
TCOF1-210ENST00000506767 ATXN1P54253 815 aaKnown RBP13.35□□□□□ -0.27
TCOF1-210ENST00000506767 HDAC4P56524 1084 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 ATP11AP98196 1134 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 DEUP1Q05D60 604 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 NME3Q13232 169 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 PDGFRLQ15198 375 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 RAB6CQ53S08 254 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 ZC3H12AQ5D1E8 599 aaKnown RBP13.35□□□□□ -0.27
TCOF1-210ENST00000506767 BRMS1LQ5PSV4 323 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 DENND1CQ8IV53 801 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 TTC16Q8NEE8 873 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 SLC35G2Q8TBE7 412 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 IRF7Q92985 503 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 RAB6CQ9H0N0 254 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 EPHX3Q9H6B9 360 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 BRD9Q9H8M2 597 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 HPS4Q9NQG7 708 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 ARHGEF38Q9NXL2 777 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 WNT6Q9Y6F9 365 aa13.35□□□□□ -0.27
TCOF1-210ENST00000506767 SYNJ2BP-COX16A0A087WUM0 186 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 RCCD1A6NED2 376 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 I6L893 689 aaPredicted RBP13.34□□□□□ -0.27
TCOF1-210ENST00000506767 GFRA2O00451 464 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 SCAMP3O14828 347 aaKnown RBP13.34□□□□□ -0.27
TCOF1-210ENST00000506767 PJA2O43164 708 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 IFNAR2P48551 515 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms