RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 CSRP3P50461 194 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 MPP1Q00013 466 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 RPS26P11Q5JNZ5 115 aaPredicted RBP6.21□□□□□ -1.42
SCLT1-207ENST00000506233 JADE1Q6IE81 842 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 CGB2Q6NT52 195 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 TMC3Q7Z5M5 1100 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 TTC30AQ86WT1 665 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 OR2C3Q8N628 320 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 EIF1ADQ8N9N8 165 aaKnown RBP6.21□□□□□ -1.42
SCLT1-207ENST00000506233 DIS3LQ8TF46 1054 aaKnown RBP6.21□□□□□ -1.42
SCLT1-207ENST00000506233 AFG1LQ8WV93 481 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 LINC01599Q8WXQ3 324 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 TLCD1Q96CP7 247 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 MMP19Q99542 508 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 DPH2Q9BQC3 489 aaPredicted RBP6.21□□□□□ -1.42
SCLT1-207ENST00000506233 LRRC19Q9H756 370 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 MIOSQ9NXC5 875 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 LCMT1Q9UIC8 334 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 GRID1Q9ULK0 1009 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 GABRQQ9UN88 632 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 BZW2Q9Y6E2 419 aaKnown RBP6.21□□□□□ -1.42
SCLT1-207ENST00000506233 F8W810 466 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 CBX4O00257 560 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 PIRO00625 290 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 SART1O43290 800 aaKnown RBP6.21□□□□□ -1.42
SCLT1-207ENST00000506233 EXOC3O60645 756 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 TBCAO75347 108 aaKnown RBP6.21□□□□□ -1.42
SCLT1-207ENST00000506233 TOM1L1O75674 476 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 BEST1O76090 585 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 CHRNA1P02708 482 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 PIK3CBP42338 1070 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 ARHGAP44Q17R89 818 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 CCDC149Q6ZUS6 474 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 TRMT1LQ7Z2T5 733 aaKnown RBP6.21□□□□□ -1.42
SCLT1-207ENST00000506233 NLRX1Q86UT6 975 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 XYLT1Q86Y38 959 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 PTRH1Q86Y79 214 aaKnown RBP6.21□□□□□ -1.42
SCLT1-207ENST00000506233 WDR49Q8IV35 697 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 CEP112Q8N8E3 955 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 ART4Q93070 314 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 CCDC34Q96HJ3 373 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 MRGPRX3Q96LB0 322 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 TRIM51Q9BSJ1 452 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 RRAGCQ9HB90 399 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 AMACRQ9UHK6 382 aa6.21□□□□□ -1.42
SCLT1-207ENST00000506233 GPC6Q9Y625 555 aaPredicted RBP6.21□□□□□ -1.42
SCLT1-207ENST00000506233 HELZP42694 1942 aaKnown RBP6.21□□□□□ -1.42
SCLT1-207ENST00000506233 A0A087WZ62 844 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 CYBAP13498 195 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 TKTP29401 623 aaKnown RBP6.2□□□□□ -1.42
SCLT1-207ENST00000506233 PTPN7P35236 360 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 PCDH1Q08174 1060 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 ZNF844Q08AG5 666 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 DMP1Q13316 513 aaPredicted RBP6.2□□□□□ -1.42
SCLT1-207ENST00000506233 SMC1AQ14683 1233 aaKnown RBP6.2□□□□□ -1.42
SCLT1-207ENST00000506233 TEX35Q5T0J7 233 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 MAP3K21Q5TCX8 1036 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 LRRC31Q6UY01 552 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 MCPH1Q8NEM0 835 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 RASSF8Q8NHQ8 419 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 U2AF1L4Q8WU68 220 aaKnown RBP6.2□□□□□ -1.42
SCLT1-207ENST00000506233 ZNF606Q8WXB4 792 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 RUBCNQ92622 972 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 PTPRN2Q92932 1015 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 FDXACB1Q9BRP7 624 aaPredicted RBP6.2□□□□□ -1.42
SCLT1-207ENST00000506233 DDX47Q9H0S4 455 aaKnown RBP6.2□□□□□ -1.42
SCLT1-207ENST00000506233 DPEP3Q9H4B8 488 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 TUBGCP4Q9UGJ1 667 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 COL1A2P08123 1366 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 MUC22E2RYF6 1773 aaPredicted RBP6.2□□□□□ -1.42
SCLT1-207ENST00000506233 ASAP2O43150 1006 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 ALDH1A1P00352 501 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 KRT14P02533 472 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 RHOQP17081 205 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 GPR3P46089 330 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 MXI1P50539 228 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 RNF144AP50876 292 aaPredicted RBP6.2□□□□□ -1.42
SCLT1-207ENST00000506233 SP4Q02446 784 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 TRAF1Q13077 416 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 SEMA5AQ13591 1074 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 IHHQ14623 411 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 FAM110CQ1W6H9 321 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 ZNF534Q76KX8 674 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 RTN4RL1Q86UN2 441 aaPredicted RBP6.2□□□□□ -1.42
SCLT1-207ENST00000506233 ANKRD35Q8N283 1001 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 KLHDC9Q8NEP7 349 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 TRIB2Q92519 343 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 NT5C3BQ969T7 300 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 C18orf25Q96B23 403 aaPredicted RBP6.2□□□□□ -1.42
SCLT1-207ENST00000506233 CCDC127Q96BQ5 260 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 DCPSQ96C86 337 aaKnown RBP6.2□□□□□ -1.42
SCLT1-207ENST00000506233 SLC2A13Q96QE2 648 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 PAAF1Q9BRP4 392 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 MCMBPQ9BTE3 642 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 ITM2CQ9NQX7 267 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 MRGBPQ9NV56 204 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 MKS1Q9NXB0 559 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 TTC3P53804 2025 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 TMCO5BA8MYB1 307 aa6.2□□□□□ -1.42
SCLT1-207ENST00000506233 F8VP50 259 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms