RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 XPO6Q96QU8 1125 aaKnown RBP11.92□□□□□ -0.5
KDM3B-203ENST00000505756 TRIM62Q9BVG3 475 aa11.92□□□□□ -0.5
KDM3B-203ENST00000505756 BBS2Q9BXC9 721 aa11.92□□□□□ -0.5
KDM3B-203ENST00000505756 STK33Q9BYT3 514 aa11.92□□□□□ -0.5
KDM3B-203ENST00000505756 NUCKS1Q9H1E3 243 aaKnown RBP11.92□□□□□ -0.5
KDM3B-203ENST00000505756 ARHGEF4Q9NR80 690 aa11.92□□□□□ -0.5
KDM3B-203ENST00000505756 WDR35Q9P2L0 1181 aa11.92□□□□□ -0.5
KDM3B-203ENST00000505756 SFMBT1Q9UHJ3 866 aa11.92□□□□□ -0.5
KDM3B-203ENST00000505756 CYTH4Q9UIA0 394 aa11.92□□□□□ -0.5
KDM3B-203ENST00000505756 AGO1Q9UL18 857 aaKnown RBP11.92□□□□□ -0.5
KDM3B-203ENST00000505756 AKR1B15C9JRZ8 316 aaPredicted RBP11.91□□□□□ -0.5
KDM3B-203ENST00000505756 E5RJQ4 531 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 NEDD8-MDP1E9PL57 170 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 F8VZ95 297 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 K7EQS6 105 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 K7ESF4 209 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 EPHB6O15197 1021 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 CACNG3O60359 315 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 LILRB5O75023 590 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 TULP3O75386 442 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 APODP05090 189 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 TPM1P09493 284 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 NCAM1P13591 858 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 TYRP14679 529 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 CYP11B1P15538 503 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 HOXA6P31267 233 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 CASP14P31944 242 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 GRIA2P42262 883 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 HARS2P49590 506 aaKnown RBP11.91□□□□□ -0.5
KDM3B-203ENST00000505756 KLK7P49862 253 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 JAM2P57087 298 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 CDK17Q00537 523 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 TPGS1Q6ZTW0 290 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 NUDT18Q6ZVK8 323 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 TMEM139Q8IV31 216 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 DENND1CQ8IV53 801 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 PASD1Q8IV76 773 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 LRRC8AQ8IWT6 810 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 FAM217AQ8IXS0 508 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 PHTF2Q8N3S3 785 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 WDTC1Q8N5D0 677 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 NAT16Q8N8M0 369 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 NEK11Q8NG66 645 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 FAM149B1Q96BN6 582 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 C2orf42Q9NWW7 574 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 DEC1Q9P2X7 70 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 CEP83Q9Y592 693 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 VPS13AQ96RL7 3174 aa11.91□□□□□ -0.5
KDM3B-203ENST00000505756 USP34Q70CQ2 3546 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 CACNA1IQ9P0X4 2223 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 PRR23AA6NEV1 266 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 CAPN9O14815 690 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 PAPSS1O43252 624 aaPredicted RBP11.9□□□□□ -0.5
KDM3B-203ENST00000505756 MSI1O43347 362 aaKnown RBP11.9□□□□□ -0.5
KDM3B-203ENST00000505756 GFRA3O60609 400 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 LATS1O95835 1130 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 FYNP06241 537 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 TNFRSF4P43489 277 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 SEC13P55735 322 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 SNX16P57768 344 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 MRPS21P82921 87 aaKnown RBP11.9□□□□□ -0.5
KDM3B-203ENST00000505756 KDSRQ06136 332 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 SYT13Q7L8C5 426 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 CPXM2Q8N436 756 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 C1orf131Q8NDD1 294 aaKnown RBP11.9□□□□□ -0.5
KDM3B-203ENST00000505756 USP33Q8TEY7 942 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 PPP1R13BQ96KQ4 1090 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 CPXM1Q96SM3 734 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 PDCL3Q9H2J4 239 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 KCNF1Q9H3M0 494 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 POPDC2Q9HBU9 364 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 FAM207AQ9NSI2 230 aaPredicted RBP11.9□□□□□ -0.5
KDM3B-203ENST00000505756 ABHD10Q9NUJ1 306 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 DNAJC17Q9NVM6 304 aaKnown RBP11.9□□□□□ -0.5
KDM3B-203ENST00000505756 STOML2Q9UJZ1 356 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 SLC8A2Q9UPR5 921 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 LUC7L2Q9Y383 392 aaKnown RBP11.9□□□□□ -0.5
KDM3B-203ENST00000505756 KIAA1549LQ6ZVL6 1849 aa11.9□□□□□ -0.5
KDM3B-203ENST00000505756 TBC1D3BA6NDS4 549 aa11.89□□□□□ -0.51
KDM3B-203ENST00000505756 PENKP01210 267 aaPredicted RBP11.89□□□□□ -0.51
KDM3B-203ENST00000505756 IGLV3-27P01718 113 aa11.89□□□□□ -0.51
KDM3B-203ENST00000505756 LMNAP02545 664 aaKnown RBP11.89□□□□□ -0.51
KDM3B-203ENST00000505756 CYBBP04839 570 aa11.89□□□□□ -0.51
KDM3B-203ENST00000505756 GLI1P08151 1106 aa11.89□□□□□ -0.51
KDM3B-203ENST00000505756 POLR2FP61218 127 aaKnown RBP11.89□□□□□ -0.51
KDM3B-203ENST00000505756 YWHAZP63104 245 aaKnown RBP11.89□□□□□ -0.51
KDM3B-203ENST00000505756 CCZ1BP86790 482 aa11.89□□□□□ -0.51
KDM3B-203ENST00000505756 CCZ1P86791 482 aaPredicted RBP11.89□□□□□ -0.51
KDM3B-203ENST00000505756 RING1Q06587 406 aa11.89□□□□□ -0.51
KDM3B-203ENST00000505756 MESP2Q0VG99 397 aa11.89□□□□□ -0.51
KDM3B-203ENST00000505756 NNTQ13423 1086 aa11.89□□□□□ -0.51
KDM3B-203ENST00000505756 HSF5Q4G112 596 aaPredicted RBP11.89□□□□□ -0.51
KDM3B-203ENST00000505756 C2orf27AQ580R0 203 aa11.89□□□□□ -0.51
KDM3B-203ENST00000505756 FYB2Q5VWT5 728 aa11.89□□□□□ -0.51
KDM3B-203ENST00000505756 NUGGCQ68CJ6 796 aa11.89□□□□□ -0.51
KDM3B-203ENST00000505756 GRAMD4Q6IC98 578 aa11.89□□□□□ -0.51
KDM3B-203ENST00000505756 ASCL5Q7RTU5 278 aa11.89□□□□□ -0.51
KDM3B-203ENST00000505756 LONP2Q86WA8 852 aa11.89□□□□□ -0.51
KDM3B-203ENST00000505756 UNC45BQ8IWX7 931 aa11.89□□□□□ -0.51
KDM3B-203ENST00000505756 CAMKK1Q8N5S9 505 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms