RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SUN1O94901 812 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 LMNAP02545 664 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 COMTP21964 271 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 CD6P30203 668 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 HOXD13P35453 343 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 GPD2P43304 727 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 NDUFV1P49821 464 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 MPP3Q13368 585 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 DCTN1Q14203 1278 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 HLXQ14774 488 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 ACOX1Q15067 660 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 ELAVL1Q15717 326 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 NFIL3Q16649 462 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 ALDH1L2Q3SY69 923 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 PREPLQ4J6C6 727 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 USP39Q53GS9 565 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 RILPL1Q5EBL4 403 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 SPECC1Q5M775 1068 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 CBWD5Q5RIA9 395 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 FAM69AQ5T7M9 428 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 DENND1BQ6P3S1 775 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 INO80CQ6PI98 192 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 ATF7IPQ6VMQ6 1270 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 KRT27Q7Z3Y8 459 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 NFKBIDQ8NI38 313 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 NOC3LQ8WTT2 800 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 TMEM171Q8WVE6 324 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 NSUN4Q96CB9 384 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 RBM17Q96I25 401 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 LRIG1Q96JA1 1093 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 PPP1R10Q96QC0 940 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 PIGSQ96S52 555 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 DPYSL5Q9BPU6 564 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 MECRQ9BV79 373 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 TAOK3Q9H2K8 898 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 SYNCQ9H7C4 482 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 PLEKHA2Q9HB19 425 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 VEZTQ9HBM0 779 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 TRIM36Q9NQ86 728 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 DIAPH3Q9NSV4 1193 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 FBXO28Q9NVF7 368 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 PPP1R14DQ9NXH3 145 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 TAS2R10Q9NYW0 307 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 RNF181Q9P0P0 153 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 TBC1D14Q9P2M4 693 aa4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 NKX1-2Q9UD57 310 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 UBE2J1Q9Y385 318 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-208ENST00000505553 A0A0U1RQG5 324 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 A0A1B0GTW7 788 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 GXYLT2A0PJZ3 443 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 MBD3L5A6NJ08 208 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 DIRC3C9JPN6 131 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 ADM5C9JUS6 153 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 PEX12O00623 359 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 AP3D1O14617 1153 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 CTIFO43310 598 aaKnown RBP4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 CBFA2T3O75081 653 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 PTP4A3O75365 173 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 TSPAN9O75954 239 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 WDR47O94967 919 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 SGPL1O95470 568 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 STARD3NLO95772 234 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 GPANK1O95872 356 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 F9P00740 461 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 CSF1RP07333 972 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 YY1P25490 414 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 ARL1P40616 181 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 PCP4P48539 62 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 DGKQP52824 942 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 TIRAPP58753 221 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 RPS7P62081 194 aaKnown RBP4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 RBM6P78332 1123 aaKnown RBP4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 DYRK1AQ13627 763 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 FHL3Q13643 280 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 TMEM196Q5HYL7 178 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 SNX30Q5VWJ9 437 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 KLHL24Q6TFL4 600 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 TMPRSS9Q7Z410 1059 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 ELOA2Q8IYF1 753 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 ABRAQ8N0Z2 381 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 ADSSL1Q8N142 457 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 PTGR2Q8N8N7 351 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 SLC2A12Q8TD20 617 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 ZNF483Q8TF39 744 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 SLC22A17Q8WUG5 538 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 OSCP1Q8WVF1 389 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 EDAQ92838 391 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 TMEM176AQ96HP8 235 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 FAR2Q96K12 515 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 OSBPL9Q96SU4 736 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 VN1R3Q9BXE9 311 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 RXFP3Q9NSD7 469 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 HSFX1Q9UBD0 423 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 TBC1D29Q9UFV1 150 aa4.28□□□□□ -1.72
TRAPPC13-208ENST00000505553 SETD1BQ9UPS6 1966 aaKnown RBP4.27□□□□□ -1.73
TRAPPC13-208ENST00000505553 PRAMEF33A0A0G2JMD5 474 aa4.27□□□□□ -1.73
TRAPPC13-208ENST00000505553 A0A1W2PS29 197 aa4.27□□□□□ -1.73
TRAPPC13-208ENST00000505553 FAM170AA1A519 330 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms