RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 F9P00740 461 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 GPD1P21695 349 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 RDXP35241 583 aaKnown RBP8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 CYLC1P35663 651 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 ATP5C1P36542 298 aaKnown RBP8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 FZD5Q13467 585 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 DPYSL2Q16555 572 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 AAK1Q2M2I8 961 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 FYB2Q5VWT5 728 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 TXNDC8Q6A555 127 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 VPS36Q86VN1 386 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 SCN4BQ8IWT1 228 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 SIX6OS1Q8N1H7 587 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 TPCN2Q8NHX9 752 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 PRICKLE1Q96MT3 831 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 TBCBQ99426 244 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 PRDM16Q9HAZ2 1276 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 LRRC4Q9HBW1 653 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 TDP1Q9NUW8 608 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 RCOR3Q9P2K3 495 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 A0A0U1RQJ8 604 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 CISD3P0C7P0 127 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 PEX5P50542 639 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 PLK1P53350 603 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 PIGHQ14442 188 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 ARHGAP15Q53QZ3 475 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 RAB6CQ53S08 254 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 PARM1Q6UWI2 310 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 ZSCAN18Q8TBC5 510 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 ATRIPQ8WXE1 791 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 C11orf70Q9BRQ4 267 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 RAB6CQ9H0N0 254 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 FAM50BQ9Y247 325 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 OR51B4Q9Y5P0 310 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 IL4RP24394 825 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 CCDC122Q5T0U0 273 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 GPR158Q5T848 1215 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 PIK3R6Q5UE93 754 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 TANGO2Q6ICL3 276 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 SLC35G2Q8TBE7 412 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 CPLX3Q8WVH0 158 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 ALG14Q96F25 216 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 TRIM7Q9C029 511 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 CNOT8Q9UFF9 292 aaKnown RBP8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 MUC3AQ02505 3323 aa8.63□□□□□ -1.03
CDC42SE2-208ENST00000505065 ABL1P00519 1130 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 RALAP11233 206 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 KRT3P12035 628 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 IGFBP4P22692 258 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 SLC1A1P43005 524 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 PLCB2Q00722 1185 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 DPYSQ14117 519 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 KLHDC8BQ8IXV7 354 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 RXFP2Q8WXD0 754 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 SPOCK2Q92563 424 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 HES6Q96HZ4 224 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 CCDC42Q96M95 316 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 AGO1Q9UL18 857 aaKnown RBP8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 SLC27A6Q9Y2P4 619 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 TRUB2O95900 331 aaKnown RBP8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 SLC6A4P31645 630 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 CTNNA1P35221 906 aaKnown RBP8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 STARD6P59095 220 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 TFF2Q03403 129 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 BPTFQ12830 3046 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 CHST9Q7L1S5 443 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 ADGRG2Q8IZP9 1017 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 TDRD5Q8NAT2 981 aaKnown RBP8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 MRPS31Q92665 395 aaKnown RBP8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 DCLK3Q9C098 648 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 MYOFQ9NZM1 2061 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 IP6K2Q9UHH9 426 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 GRID2IPA4D2P6 1211 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 DDX3YO15523 660 aaKnown RBP8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 KCNA5P22460 613 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 IL1R2P27930 398 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 USP8P40818 1118 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 KCNQ1P51787 676 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 TTC39BQ5VTQ0 682 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 MYEOVQ96EZ4 313 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 MRPS23Q9Y3D9 190 aaKnown RBP8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 LRRK1Q38SD2 2015 aa8.62□□□□□ -1.03
CDC42SE2-208ENST00000505065 PI4K2BG5E9Z4 385 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 CES2O00748 559 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 FANCGO15287 622 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 KRT83P78385 493 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 PDGFRLQ15198 375 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 SH3PXD2AQ5TCZ1 1133 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 ZNF783Q6ZMS7 281 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 ARID3BQ8IVW6 561 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 SLC44A3Q8N4M1 653 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 ARL14EPQ8N8R7 260 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 FAM131CQ96AQ9 280 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 BTN2A3PQ96KV6 586 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 NUP85Q9BW27 656 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 TBC1D30Q9Y2I9 924 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 H3BQ06 376 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 CACNG3O60359 315 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 TBX18O95935 607 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms