RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 FNIP2Q9P278 1114 aa9.74□□□□□ -0.85
TPM3-218ENST00000505010 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.74□□□□□ -0.85
TPM3-218ENST00000505010 MAGED2Q9UNF1 606 aaPredicted RBP9.74□□□□□ -0.85
TPM3-218ENST00000505010 SCML2Q9UQR0 700 aa9.74□□□□□ -0.85
TPM3-218ENST00000505010 LZTS1Q9Y250 596 aa9.74□□□□□ -0.85
TPM3-218ENST00000505010 V9GYY5 206 aaPredicted RBP9.74□□□□□ -0.85
TPM3-218ENST00000505010 GVINP1Q7Z2Y8 2422 aa9.74□□□□□ -0.85
TPM3-218ENST00000505010 DMXL1Q9Y485 3027 aa9.74□□□□□ -0.85
TPM3-218ENST00000505010 UQCRHLA0A096LP55 91 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 PER2O15055 1255 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 LILRB3O75022 631 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 ZRANB2O95218 330 aaKnown RBP eCLIP9.73□□□□□ -0.85
TPM3-218ENST00000505010 FYNP06241 537 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 UQCRHP07919 91 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 SPATA31D3P0C874 917 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 RDXP35241 583 aaKnown RBP9.73□□□□□ -0.85
TPM3-218ENST00000505010 CETN2P41208 172 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 ALDH1A3P47895 512 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 ATXN1P54253 815 aaKnown RBP9.73□□□□□ -0.85
TPM3-218ENST00000505010 HDAC4P56524 1084 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 ERVFC1P60507 584 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 PITX1P78337 314 aaPredicted RBP9.73□□□□□ -0.85
TPM3-218ENST00000505010 UBE3AQ05086 875 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 DEUP1Q05D60 604 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 PLD1Q13393 1074 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 KRT81Q14533 505 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 VEPH1Q14D04 833 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 LLGL1Q15334 1064 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 TAF12Q16514 161 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 ATP13A4Q4VNC1 1196 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 SPATA31D4Q6ZUB0 917 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 RSRC2Q7L4I2 434 aaKnown RBP9.73□□□□□ -0.85
TPM3-218ENST00000505010 DGLUCYQ7Z3D6 616 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 ZNF572Q7Z3I7 529 aaPredicted RBP9.73□□□□□ -0.85
TPM3-218ENST00000505010 ADAT2Q7Z6V5 191 aaKnown RBP9.73□□□□□ -0.85
TPM3-218ENST00000505010 SCD5Q86SK9 330 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 TAC4Q86UU9 113 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 SLC13A5Q86YT5 568 aaPredicted RBP9.73□□□□□ -0.85
TPM3-218ENST00000505010 RCOR2Q8IZ40 523 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 DQX1Q8TE96 717 aaKnown RBP9.73□□□□□ -0.85
TPM3-218ENST00000505010 RNF139Q8WU17 664 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 CENPIQ92674 756 aaPredicted RBP9.73□□□□□ -0.85
TPM3-218ENST00000505010 RNF25Q96BH1 459 aaPredicted RBP9.73□□□□□ -0.85
TPM3-218ENST00000505010 KLHL5Q96PQ7 755 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 SLITRK1Q96PX8 696 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 NAP1L3Q99457 506 aaPredicted RBP9.73□□□□□ -0.85
TPM3-218ENST00000505010 ADAM33Q9BZ11 813 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 NMUR1Q9HB89 426 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 ABCC13Q9NSE7 274 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.73□□□□□ -0.85
TPM3-218ENST00000505010 GPATCH2LQ9NWQ4 482 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 COMMD8Q9NX08 183 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 DDIT4Q9NX09 232 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 RRN3Q9NYV6 651 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 HSFX1Q9UBD0 423 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 INSL5Q9Y5Q6 135 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 DENND4CQ5VZ89 1909 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 ANAPC1Q9H1A4 1944 aa9.73□□□□□ -0.85
TPM3-218ENST00000505010 GOLGA6L10A0A0M3HER8 536 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 MED19A0JLT2 244 aaPredicted RBP9.72□□□□□ -0.85
TPM3-218ENST00000505010 C2orf71A6NGG8 1288 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 HIDE1A8MVS5 230 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 EFCAB8A8MWE9 144 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 KRIT1O00522 736 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 TGM5O43548 720 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 KRT37O76014 449 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 SRGAP2BP0DMP2 458 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 RARAP10276 462 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 RALAP11233 206 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 KLRC2P26717 231 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 PGFP49763 221 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 TWF1Q12792 350 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 TAF10Q12962 218 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 ASTLQ6HA08 431 aaPredicted RBP9.72□□□□□ -0.85
TPM3-218ENST00000505010 MFSD7Q6UXD7 560 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 SPOCD1Q6ZMY3 1216 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 CYP4V2Q6ZWL3 525 aaPredicted RBP9.72□□□□□ -0.85
TPM3-218ENST00000505010 SND1Q7KZF4 910 aaKnown RBP eCLIP9.72□□□□□ -0.85
TPM3-218ENST00000505010 MON1AQ86VX9 555 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 FAM131BQ86XD5 332 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 TCEAL8Q8IYN2 117 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 CCDC185Q8N715 623 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 NOA1Q8NC60 698 aaKnown RBP9.72□□□□□ -0.85
TPM3-218ENST00000505010 KCTD6Q8NC69 237 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 SPATA4Q8NEY3 305 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 RAPGEF5Q92565 580 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 NT5C3BQ969T7 300 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 CEP295NLQ96MC4 621 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 CDCA3Q99618 268 aaPredicted RBP9.72□□□□□ -0.85
TPM3-218ENST00000505010 SNRNP25Q9BV90 132 aaKnown RBP9.72□□□□□ -0.85
TPM3-218ENST00000505010 AP1M1Q9BXS5 423 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 OSBPL8Q9BZF1 889 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 MFSD1Q9H3U5 465 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 SMOC2Q9H3U7 446 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 TLR8Q9NR97 1041 aaKnown RBP9.72□□□□□ -0.85
TPM3-218ENST00000505010 RBM12Q9NTZ6 932 aaKnown RBP9.72□□□□□ -0.85
TPM3-218ENST00000505010 IL37Q9NZH6 218 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 CALCOCO1Q9P1Z2 691 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 TTC7AQ9ULT0 858 aaPredicted RBP9.72□□□□□ -0.85
TPM3-218ENST00000505010 MAFFQ9ULX9 164 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms