RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 DDX23Q9BUQ8 820 aaKnown RBP5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 MECRQ9BV79 373 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 VPS45Q9NRW7 570 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 SERTAD4Q9NUC0 356 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 DLL3Q9NYJ7 618 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 TFCP2L1Q9NZI6 479 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 NDUFAF4Q9P032 175 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 KCND3Q9UK17 655 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 RAB21Q9UL25 225 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 ADAMTS5Q9UNA0 930 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 UBE2J1Q9Y385 318 aaPredicted RBP5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 DMRT1Q9Y5R6 373 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 LRRFIP2Q9Y608 721 aaKnown RBP5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 TBC1D3DA0A087WVF3 549 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 TBC1D3IA0A087WXS9 549 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 TBC1D3EA0A087X179 549 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 TBC1D3KA0A087X1G2 549 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 TBC1D3BA6NDS4 549 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 FAM90A18PA6NE21 464 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 TBC1D3FA6NER0 549 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 FAM90A16PA6NEW6 464 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 FAM90A9PA6NNJ1 464 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 FAM90A5PA8MXJ8 464 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 TBC1D3LB9A6J9 549 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 H0YIZ8 118 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 M0QYT0 321 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 NCAM2O15394 837 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 EXOC3O60645 756 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 POLBP06746 335 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 FAM90A15PP0C7V4 464 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 FAM90A14PP0C7W9 464 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 TBC1D3HP0C7X1 549 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 TMIGD3P0DMS9 266 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 PEPDP12955 493 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 JUPP14923 745 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 CXCR5P32302 372 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 IGHMBP2P38935 993 aaKnown RBP5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 MPLP40238 635 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 DIO1P49895 249 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 COPB1P53618 953 aaKnown RBP5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 KCNJ12Q14500 433 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 SLC4A8Q2Y0W8 1093 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 KIAA0895LQ68EN5 471 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 TBC1D3GQ6DHY5 549 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 TBC1D3CQ6IPX1 549 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 ANKRD16Q6P6B7 361 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 KIRREL2Q6UWL6 708 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 RINLQ6ZS11 566 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 TBC1D3Q8IZP1 549 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 USP13Q92995 863 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 PRR11Q96HE9 360 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 HS6ST2Q96MM7 605 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 LENG8Q96PV6 779 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 SAP30LQ9HAJ7 183 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 GABRQQ9UN88 632 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 LZTS1Q9Y250 596 aa5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 RRP7AQ9Y3A4 280 aaKnown RBP5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 EPN1Q9Y6I3 576 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-205ENST00000504243 SALL3Q9BXA9 1300 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 DHHO43323 396 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 SUV39H1O43463 412 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 FAM155BO75949 473 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 SLC3A2P08195 630 aaKnown RBP5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 MYCLP12524 364 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 FPR3P25089 353 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 PSG6Q00889 435 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 FOXI1Q12951 378 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 TRIM60Q495X7 471 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 GALNTL6Q49A17 601 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 TSTD2Q5T7W7 516 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 TTC22Q5TAA0 569 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 FAM90A2PQ658T7 463 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 SLC29A4Q7RTT9 530 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 RASAL3Q86YV0 1011 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 PNPLA1Q8N8W4 532 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 PNISRQ8TF01 805 aaKnown RBP5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 CTHRC1Q96CG8 243 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 TBATAQ96M53 351 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 TRPC5Q9UL62 973 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 SLC12A4Q9UP95 1085 aa5.59□□□□□ -1.51
TRAPPC13-205ENST00000504243 CCDC187A0A096LP49 1063 aa5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 CKMT1AP12532 417 aa5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 GRK5P34947 590 aa5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 ADRA1BP35368 520 aa5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 LMAN2Q12907 356 aa5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 FAM110CQ1W6H9 321 aa5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 AAK1Q2M2I8 961 aa5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 ERCC6LQ2NKX8 1250 aa5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 AARS2Q5JTZ9 985 aaKnown RBP5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 AKNAD1Q5T1N1 836 aa5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 MTHFD1LQ6UB35 978 aa5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 PCSK4Q6UW60 755 aa5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 CIPCQ9C0C6 399 aa5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 SLITRK6Q9H5Y7 841 aa5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 NOD2Q9HC29 1040 aa5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 IFT80Q9P2H3 777 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 ANAPC4Q9UJX5 808 aa5.58□□□□□ -1.52
TRAPPC13-205ENST00000504243 PCDHA10Q9Y5I2 948 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms