RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 MAGEA6P43360 314 aa22.11■■□□□ 1.13
UBE2D3-216ENST00000503742 RNASELQ05823 741 aaKnown RBP22.11■■□□□ 1.13
UBE2D3-216ENST00000503742 EFHC2Q5JST6 749 aa22.11■■□□□ 1.13
UBE2D3-216ENST00000503742 TAOK1Q7L7X3 1001 aa22.11■■□□□ 1.13
UBE2D3-216ENST00000503742 MDM1Q8TC05 714 aa22.11■■□□□ 1.13
UBE2D3-216ENST00000503742 ELAC1Q9H777 363 aaKnown RBP22.11■■□□□ 1.13
UBE2D3-216ENST00000503742 ANLNQ9NQW6 1124 aa22.11■■□□□ 1.13
UBE2D3-216ENST00000503742 FBXW11Q9UKB1 542 aa22.11■■□□□ 1.13
UBE2D3-216ENST00000503742 CLUHO75153 1309 aa22.11■■□□□ 1.13
UBE2D3-216ENST00000503742 GCAP28676 217 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 ATP5DP30049 168 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 GPX6P59796 221 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 BFSP2Q13515 415 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 DPYSQ14117 519 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 FOXR1Q6PIV2 292 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 C4orf22Q6V702 233 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 RIBC1Q8N443 379 aaPredicted RBP22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 ADAM32Q8TC27 787 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 LRRN4Q8WUT4 740 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 ARHGEF2Q92974 986 aaKnown RBP22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 SAGE1Q9NXZ1 904 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 SF3B1O75533 1304 aaKnown RBP eCLIP22.1■■□□□ 1.132e-6■■■■■ 58.5
UBE2D3-216ENST00000503742 I6L893 689 aaPredicted RBP22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 DNM1LO00429 736 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 GCATO75600 419 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 OAZ2O95190 189 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 PPARDQ03181 441 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 SEMA3BQ13214 749 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 CCDC38Q502W7 563 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 PLEKHG4Q58EX7 1191 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 TDRPQ86YL5 185 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 PDIK1LQ8N165 341 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 SH3TC2Q8TF17 1288 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 RAB6BQ9NRW1 208 aa22.1■■□□□ 1.13
UBE2D3-216ENST00000503742 HACD1B0YJ81 288 aa22.09■■□□□ 1.13
UBE2D3-216ENST00000503742 ENPP3O14638 875 aa22.09■■□□□ 1.13
UBE2D3-216ENST00000503742 BSPRYQ5W0U4 402 aa22.09■■□□□ 1.13
UBE2D3-216ENST00000503742 C4orf50Q6ZRC1 276 aa22.09■■□□□ 1.13
UBE2D3-216ENST00000503742 BZW1Q7L1Q6 419 aaKnown RBP22.09■■□□□ 1.13
UBE2D3-216ENST00000503742 BEND5Q7L4P6 421 aa22.09■■□□□ 1.13
UBE2D3-216ENST00000503742 ANKMY2Q8IV38 441 aa22.09■■□□□ 1.13
UBE2D3-216ENST00000503742 CYP4X1Q8N118 509 aa22.09■■□□□ 1.13
UBE2D3-216ENST00000503742 PYROXD1Q8WU10 500 aa22.09■■□□□ 1.13
UBE2D3-216ENST00000503742 UNC93B1Q9H1C4 597 aa22.09■■□□□ 1.13
UBE2D3-216ENST00000503742 VPS37BQ9H9H4 285 aa22.09■■□□□ 1.13
UBE2D3-216ENST00000503742 DNAJB4Q9UDY4 337 aa22.09■■□□□ 1.13
UBE2D3-216ENST00000503742 TRIM17Q9Y577 477 aa22.09■■□□□ 1.13
UBE2D3-216ENST00000503742 EXOC1LA0A1B0GW35 172 aa22.08■■□□□ 1.13
UBE2D3-216ENST00000503742 C5orf60A6NFR6 353 aa22.08■■□□□ 1.13
UBE2D3-216ENST00000503742 MFSD11O43934 449 aa22.08■■□□□ 1.13
UBE2D3-216ENST00000503742 F9P00740 461 aa22.08■■□□□ 1.13
UBE2D3-216ENST00000503742 AMHP03971 560 aa22.08■■□□□ 1.13
UBE2D3-216ENST00000503742 CHN1P15882 459 aa22.08■■□□□ 1.13
UBE2D3-216ENST00000503742 OR1G1P47890 313 aa22.08■■□□□ 1.13
UBE2D3-216ENST00000503742 FAM182AQ5T1J6 154 aa22.08■■□□□ 1.13
UBE2D3-216ENST00000503742 PPP1R21Q6ZMI0 780 aa22.08■■□□□ 1.13
UBE2D3-216ENST00000503742 SPATA2LQ8IUW3 424 aaPredicted RBP22.08■■□□□ 1.13
UBE2D3-216ENST00000503742 DBF4BQ8NFT6 615 aa22.08■■□□□ 1.13
UBE2D3-216ENST00000503742 CCDC110Q8TBZ0 833 aa22.08■■□□□ 1.13
UBE2D3-216ENST00000503742 EDEM1Q92611 657 aa22.08■■□□□ 1.13
UBE2D3-216ENST00000503742 SELENOSQ9BQE4 189 aa22.08■■□□□ 1.13
UBE2D3-216ENST00000503742 DDIT4Q9NX09 232 aa22.08■■□□□ 1.13
UBE2D3-216ENST00000503742 TNFRSF10BO14763 440 aa22.08■■□□□ 1.12
UBE2D3-216ENST00000503742 DCLK1O15075 740 aa22.08■■□□□ 1.12
UBE2D3-216ENST00000503742 TRAPPC3O43617 180 aa22.08■■□□□ 1.12
UBE2D3-216ENST00000503742 TSHRP16473 764 aa22.08■■□□□ 1.12
UBE2D3-216ENST00000503742 CXCR3P49682 368 aa22.08■■□□□ 1.12
UBE2D3-216ENST00000503742 PAFAH1B3Q15102 231 aaKnown RBP22.08■■□□□ 1.12
UBE2D3-216ENST00000503742 RFX8Q6ZV50 586 aa22.08■■□□□ 1.12
UBE2D3-216ENST00000503742 ATP11CQ8NB49 1132 aa22.08■■□□□ 1.12
UBE2D3-216ENST00000503742 MAML1Q92585 1016 aa22.08■■□□□ 1.12
UBE2D3-216ENST00000503742 COLEC11Q9BWP8 271 aa22.08■■□□□ 1.12
UBE2D3-216ENST00000503742 KLC2Q9H0B6 622 aa22.08■■□□□ 1.12
UBE2D3-216ENST00000503742 ZCWPW1Q9H0M4 648 aa22.08■■□□□ 1.12
UBE2D3-216ENST00000503742 RABEP2Q9H5N1 569 aa22.08■■□□□ 1.12
UBE2D3-216ENST00000503742 FAM72CH0Y354 149 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 EEF2KO00418 725 aaKnown RBP22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 CREB3O43889 395 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 SEC24CP53992 1094 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 BBS9Q3SYG4 887 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 FAM72AQ5TYM5 149 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 FAM72DQ6L9T8 149 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 FAM72BQ86X60 149 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 FBXO36Q8NEA4 188 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 SCAMP5Q8TAC9 235 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 TFB1MQ8WVM0 346 aaKnown RBP22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 FAM193BQ96PV7 902 aaPredicted RBP22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 FRMD8Q9BZ67 464 aaPredicted RBP22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 PPCSQ9HAB8 311 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 ETNK1Q9HBU6 452 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.07■■□□□ 1.127e-20■□□□□ 11.3
UBE2D3-216ENST00000503742 PRG3Q9Y2Y8 225 aaPredicted RBP22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 PITPNM1O00562 1244 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 VAV1P15498 845 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 HCAR3P49019 387 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 RASA2Q15283 850 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 HEATR6Q6AI08 1181 aaKnown RBP22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 NLRP14Q86W24 1093 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 CCDC33Q8N5R6 958 aa22.07■■□□□ 1.12
UBE2D3-216ENST00000503742 ATXN2LQ8WWM7 1075 aaKnown RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms