RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 HEMGNQ9BXL5 484 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 PARD6BQ9BYG5 372 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 DCLK3Q9C098 648 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 DDX47Q9H0S4 455 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 OSBPL2Q9H1P3 480 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 CRISPLD1Q9H336 500 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 PLEKHA4Q9H4M7 779 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 DHX35Q9H5Z1 703 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 ANKZF1Q9H8Y5 726 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 FAM114A2Q9NRY5 505 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 PIGVQ9NUD9 493 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 KLHL11Q9NVR0 708 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 ARHGEF38Q9NXL2 777 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 TRPM5Q9NZQ8 1165 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 HBS1LQ9Y450 684 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 INSL5Q9Y5Q6 135 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 RAD54BQ9Y620 910 aa8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 V9GYY5 206 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-202ENST00000503338 COL4A4P53420 1690 aaPredicted RBP8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 CFAP69A5D8W1 941 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 MCF2LO15068 1137 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 DAPK3O43293 454 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 RAD51CO43502 376 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 HEXIM1O94992 359 aaKnown RBP8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 SEC24AO95486 1093 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 APOEP02649 317 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 LRG1P02750 347 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 ITGAVP06756 1048 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 KRT10P13645 584 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 HOXA9P31269 272 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 STIP1P31948 543 aaKnown RBP8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 SERPINB6P35237 376 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 ATP5C1P36542 298 aaKnown RBP8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 CDR1P51861 262 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 ERVK-21P61565 698 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 USP46P62068 366 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 NRG1Q02297 640 aaPredicted RBP8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 RING1Q06587 406 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 TWF1Q12792 350 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 XRCC4Q13426 336 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 BYSLQ13895 437 aaKnown RBP8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 TRIP4Q15650 581 aaPredicted RBP8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 ANKRD20A8PQ5CZ79 823 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 PPP6R3Q5H9R7 873 aaPredicted RBP8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 OTUD1Q5VV17 481 aaPredicted RBP8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 NUGGCQ68CJ6 796 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 SLC9A4Q6AI14 798 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 LILRA6Q6PI73 481 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 JAMLQ86YT9 394 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 UNC45BQ8IWX7 931 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 CCDC185Q8N715 623 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 ATP6V0D2Q8N8Y2 350 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 CCDC89Q8N998 374 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 MICAL1Q8TDZ2 1067 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 GIPC2Q8TF65 315 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 ANKRD7Q92527 254 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 C1orf74Q96LT6 269 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 CSPG4P5Q96PW8 444 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 TKTL2Q9H0I9 626 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 LMAN2LQ9H0V9 348 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 RETREG1Q9H6L5 497 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 AMACRQ9UHK6 382 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 MSRAQ9UJ68 235 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 DNMT3LQ9UJW3 386 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 MAGED2Q9UNF1 606 aaPredicted RBP8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 CLUHO75153 1309 aa8.43□□□□□ -1.06
TOPBP1-202ENST00000503338 PTPRSQ13332 1948 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 SYNJ2BP-COX16A0A087WUM0 186 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 TCRBV7S2A1N4TA0A589 114 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 LCHNA4D1U4 455 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 ZNF840PA6NDX5 716 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 C2orf71A6NGG8 1288 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 SOBPA7XYQ1 873 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 HACD1B0YJ81 288 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 H3BNC9 293 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 EEF2KO00418 725 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 NCAM2O15394 837 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 FGF10O15520 208 aaPredicted RBP8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 TGM5O43548 720 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 LIASO43766 372 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 TLR5O60602 858 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 SOAT2O75908 522 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 POU2F2P09086 479 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 H2AFXP16104 143 aaPredicted RBP8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 HMGA1P17096 107 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 IL4RP24394 825 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 CDC25CP30307 473 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 ACTN2P35609 894 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 ATXN1P54253 815 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 VCPP55072 806 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 TBX4P57082 545 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 TPI1P60174 286 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 PITX1P78337 314 aaPredicted RBP8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 COG7P83436 770 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 GUCY2DQ02846 1103 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 NAA30Q147X3 362 aaPredicted RBP8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 NOMO1Q15155 1222 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 PPP1R7Q15435 360 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms