RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 HBS1LQ9Y450 684 aaKnown RBP6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 STON1Q9Y6Q2 735 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 CEP295Q9C0D2 2601 aa6.41□□□□□ -1.38
LSM3P4-201ENST00000502948 TP53BP1Q12888 1972 aaPredicted RBP6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 SPEGQ15772 3267 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 A0A1W2PQ27 194 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 A0A1W2PQ64 194 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 C10orf142B7Z368 130 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 TULP1O00294 542 aaPredicted RBP6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 TRIM24O15164 1050 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 PMM2O15305 246 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 HYAL3O43820 417 aaPredicted RBP6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 DFNA5O60443 496 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 CER1O95813 267 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 CYBBP04839 570 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 CDK4P11802 303 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 NCAM1P13591 858 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 KRT13P13646 458 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 CASP1P29466 404 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 PIK3CAP42336 1068 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 IL12RB1P42701 662 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 TPMTP51580 245 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 COPAP53621 1224 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 PPP3CAQ08209 521 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 DPYDQ12882 1025 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 ORC1Q13415 861 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 ARID5BQ14865 1188 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 TRIP4Q15650 581 aaPredicted RBP6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 PLEKHG6Q3KR16 790 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 FUT11Q495W5 492 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 C10orf120Q5SQS8 335 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 PPP1R26Q5T8A7 1209 aaPredicted RBP6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 FOXR2Q6PJQ5 311 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 LRSAM1Q6UWE0 723 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 CCNI2Q6ZMN8 369 aaPredicted RBP6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 TPGS1Q6ZTW0 290 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 TOGARAM2Q6ZUX3 1019 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 ARMCX6Q7L4S7 300 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 TTC30AQ86WT1 665 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 TMPRSS6Q8IU80 811 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 KDM1BQ8NB78 822 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 FBXL13Q8NEE6 735 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 TAS1R2Q8TE23 839 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 WFIKKN2Q8TEU8 576 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 ZCCHC14Q8WYQ9 949 aaKnown RBP6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 PRCCQ92733 491 aaPredicted RBP6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 GOLGA1Q92805 767 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 TMEM176AQ96HP8 235 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 CDC6Q99741 560 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 GTPBP4Q9BZE4 634 aaKnown RBP6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 MKRN2Q9H000 416 aaKnown RBP6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 TMEM245Q9H330 911 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 APOBEC3GQ9HC16 384 aaKnown RBP6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 FAM49BQ9NUQ9 324 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 ELOVL2Q9NXB9 296 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 NAGPAQ9UK23 515 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 PCOLCE2Q9UKZ9 415 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 STRIP2Q9ULQ0 834 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 CYP8B1Q9UNU6 501 aa6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 APOBEC2Q9Y235 224 aaKnown RBP6.4□□□□□ -1.38
LSM3P4-201ENST00000502948 NYNRINQ9P2P1 1898 aaKnown RBP6.4□□□□□ -1.39
LSM3P4-201ENST00000502948 TMEM131Q92545 1883 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 KCNJ18B7U540 433 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 SCAMP3O14828 347 aaKnown RBP6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 XPO1O14980 1071 aaKnown RBP6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 BCAT2O15382 392 aaPredicted RBP6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 FLRT2O43155 660 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 IRAK2O43187 625 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 PCDHGA12O60330 932 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 SYNCRIPO60506 623 aaKnown RBP6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 FTH1P19P0C7X4 201 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 IRF1P10914 325 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 PFKFB1P16118 471 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 ADORA2BP29275 332 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 GRIA4P48058 902 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 GCLMP48507 274 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 AFF3P51826 1226 aaKnown RBP6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 RAD23BP54727 409 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 YWHAGP61981 247 aaKnown RBP eCLIP6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 YWHAEP62258 255 aaKnown RBP6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 RING1Q06587 406 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 SFSWAPQ12872 951 aaKnown RBP6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 GRIK2Q13002 908 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 NNTQ13423 1086 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 ADAM9Q13443 819 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 ZNF234Q14588 700 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 SUZ12Q15022 739 aaKnown RBP6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 GEN1Q17RS7 908 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 ADGRF1Q5T601 910 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 CEP135Q66GS9 1140 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 SPOPLQ6IQ16 392 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 SCARA5Q6ZMJ2 495 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 USP30Q70CQ3 517 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 BEND5Q7L4P6 421 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 TMPRSS7Q7RTY8 843 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 PIGZQ86VD9 579 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 NAXDQ8IW45 347 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 ZC3H3Q8IXZ2 948 aaKnown RBP6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 FAM186BQ8IYM0 893 aa6.39□□□□□ -1.39
LSM3P4-201ENST00000502948 RGL4Q8IZJ4 473 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms