RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 NPLOC4Q8TAT6 608 aa17.13■□□□□ 0.33
VCAN-204ENST00000502527 HTR3CQ8WXA8 447 aa17.13■□□□□ 0.33
VCAN-204ENST00000502527 SLC7A6OSQ96CW6 309 aaPredicted RBP17.13■□□□□ 0.33
VCAN-204ENST00000502527 MAGEB5Q9BZ81 275 aa17.13■□□□□ 0.33
VCAN-204ENST00000502527 SMYD2Q9NRG4 433 aa17.13■□□□□ 0.33
VCAN-204ENST00000502527 MKS1Q9NXB0 559 aa17.13■□□□□ 0.33
VCAN-204ENST00000502527 NOP53Q9NZM5 478 aaKnown RBP17.13■□□□□ 0.33
VCAN-204ENST00000502527 LNPEPQ9UIQ6 1025 aa17.13■□□□□ 0.33
VCAN-204ENST00000502527 PLLPQ9Y342 182 aa17.13■□□□□ 0.33
VCAN-204ENST00000502527 L3MBTL1Q9Y468 752 aa17.13■□□□□ 0.33
VCAN-204ENST00000502527 USP3Q9Y6I4 520 aa17.13■□□□□ 0.33
VCAN-204ENST00000502527 DGKIO75912 1065 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 CBX6O95503 412 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 GOT1P17174 413 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 AMPD1P23109 780 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 FDFT1P37268 417 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 CCNFP41002 786 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 SERPINB9P50453 376 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 CDK16Q00536 496 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 SNX17Q15036 470 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 ZNF618Q5T7W0 954 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 HACE1Q8IYU2 909 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 ADGRF2Q8IZF7 708 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 DNAJB3Q8WWF6 145 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 STAMBPL1Q96FJ0 436 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 OLFM3Q96PB7 478 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 PARK7Q99497 189 aaKnown RBP17.12■□□□□ 0.33
VCAN-204ENST00000502527 FZD10Q9ULW2 581 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 PCDHA11Q9Y5I1 949 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 KAT6AQ92794 2004 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 A0A0A0MRY4 1105 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 RFPL1O75677 317 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 CSH1P0DML2 217 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 CSH2P0DML3 217 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 PTPN4P29074 926 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 SULT1E1P49888 294 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 MFSD10Q14728 455 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 FAM110CQ1W6H9 321 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 CYS1Q717R9 158 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 DEFB106AQ8N104 65 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 SPATA13Q96N96 652 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 FERMT1Q9BQL6 677 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 TBC1D10AQ9BXI6 508 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 HEY2Q9UBP5 337 aa17.12■□□□□ 0.33
VCAN-204ENST00000502527 I3L4J1 428 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 DNAJC6O75061 913 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 STK10O94804 968 aaKnown RBP17.11■□□□□ 0.33
VCAN-204ENST00000502527 ANP32DO95626 131 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 MLNP12872 115 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 YBX3P16989 372 aaKnown RBP eCLIP17.11■□□□□ 0.33
VCAN-204ENST00000502527 WARSP23381 471 aaKnown RBP17.11■□□□□ 0.33
VCAN-204ENST00000502527 CTC1Q2NKJ3 1217 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 ANKRD20A2Q5SQ80 823 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 ANKRD20A1Q5TYW2 823 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 ANKRD20A3Q5VUR7 823 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 CDHR3Q6ZTQ4 885 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 PIGZQ86VD9 579 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 LONP2Q86WA8 852 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 FAM131BQ86XD5 332 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 MPP5Q8N3R9 675 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 CCDC33Q8N5R6 958 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 B3GALNT2Q8NCR0 500 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 GIMAP7Q8NHV1 300 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 PPP1R13LQ8WUF5 828 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 FAM149B1Q96BN6 582 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 HNRNPABQ99729 332 aaKnown RBP17.11■□□□□ 0.33
VCAN-204ENST00000502527 DUSP16Q9BY84 665 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 RNF39Q9H2S5 420 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 YY1AP1Q9H869 796 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 TRIP11Q15643 1979 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 UGT1A9O60656 530 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 DAB1O75553 588 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 HAUS5O94927 633 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 DLDP09622 509 aaKnown RBP17.11■□□□□ 0.33
VCAN-204ENST00000502527 IBSPP21815 317 aaPredicted RBP17.11■□□□□ 0.33
VCAN-204ENST00000502527 ZBTB16Q05516 673 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 ADIGQ0VDE8 80 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 BMPR2Q13873 1038 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 UBXN11Q5T124 520 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 TRMT10BQ6PF06 316 aaKnown RBP17.11■□□□□ 0.33
VCAN-204ENST00000502527 DENND5BQ6ZUT9 1274 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 PYROXD2Q8N2H3 581 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 TOP6BLQ8N6T0 577 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 TMEM40Q8WWA1 233 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 TMEM120AQ9BXJ8 343 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 UGT1A7Q9HAW7 530 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 UGT1A10Q9HAW8 530 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 UGT1A8Q9HAW9 530 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 KCNK13Q9HB14 408 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 ARHGEF4Q9NR80 690 aa17.11■□□□□ 0.33
VCAN-204ENST00000502527 GNEQ9Y223 722 aaKnown RBP17.11■□□□□ 0.33
VCAN-204ENST00000502527 H3BRJ5 948 aa17.1■□□□□ 0.33
VCAN-204ENST00000502527 CNTFP26441 200 aa17.1■□□□□ 0.33
VCAN-204ENST00000502527 TKTP29401 623 aaKnown RBP17.1■□□□□ 0.33
VCAN-204ENST00000502527 LILRA4P59901 499 aa17.1■□□□□ 0.33
VCAN-204ENST00000502527 SOX4Q06945 474 aaPredicted RBP17.1■□□□□ 0.33
VCAN-204ENST00000502527 NBPF20Q3BBV1 942 aa17.1■□□□□ 0.33
VCAN-204ENST00000502527 ATG16L1Q676U5 607 aa17.1■□□□□ 0.33
VCAN-204ENST00000502527 DEPDC1BQ8WUY9 529 aa17.1■□□□□ 0.33
VCAN-204ENST00000502527 SLC13A1Q9BZW2 595 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms