RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 CFAP69A5D8W1 941 aa18.9■□□□□ 0.62
LINC00535-201ENST00000501400 SMIM23A6NLE4 172 aa18.9■□□□□ 0.62
LINC00535-201ENST00000501400 GOLGA8MH3BSY2 632 aa18.9■□□□□ 0.62
LINC00535-201ENST00000501400 IGLV3-25P01717 112 aa18.9■□□□□ 0.62
LINC00535-201ENST00000501400 AIF1P55008 147 aa18.9■□□□□ 0.62
LINC00535-201ENST00000501400 TMEM173Q86WV6 379 aaPredicted RBP18.9■□□□□ 0.62
LINC00535-201ENST00000501400 STKLD1Q8NE28 680 aa18.9■□□□□ 0.62
LINC00535-201ENST00000501400 DQX1Q8TE96 717 aaKnown RBP18.9■□□□□ 0.62
LINC00535-201ENST00000501400 WDR83Q9BRX9 315 aaKnown RBP18.9■□□□□ 0.62
LINC00535-201ENST00000501400 FBXW11Q9UKB1 542 aa18.9■□□□□ 0.62
LINC00535-201ENST00000501400 LRFN2Q9ULH4 789 aa18.9■□□□□ 0.62
LINC00535-201ENST00000501400 H3BRJ5 948 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 BANF1O75531 89 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 CYP2C18P33260 490 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 GRIK1P39086 918 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 PBX3P40426 434 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 SLCO1A2P46721 670 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 NR2C2P49116 596 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 MAGOHP61326 146 aaKnown RBP18.89■□□□□ 0.61
LINC00535-201ENST00000501400 TLE2Q04725 743 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 DMTNQ08495 405 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 XRCC4Q13426 336 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 SLC45A4Q5BKX6 768 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 TNFAIP8L3Q5GJ75 292 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 FAM171A1Q5VUB5 890 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 CEP128Q6ZU80 1094 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 CDKL3Q8IVW4 592 aaPredicted RBP18.89■□□□□ 0.61
LINC00535-201ENST00000501400 PKNOX2Q96KN3 472 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 BEGAINQ9BUH8 593 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 COLEC11Q9BWP8 271 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 PHACTR1Q9C0D0 580 aa18.89■□□□□ 0.61
LINC00535-201ENST00000501400 TLDC2A0PJX2 215 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 DGKIO75912 1065 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 ABHD2P08910 425 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 FGFR3P22607 806 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 HPDP32754 393 aaPredicted RBP18.88■□□□□ 0.61
LINC00535-201ENST00000501400 CXCR3P49682 368 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 GPR15P49685 360 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 BASP1P80723 227 aaKnown RBP18.88■□□□□ 0.61
LINC00535-201ENST00000501400 EIF4EBP2Q13542 120 aaPredicted RBP18.88■□□□□ 0.61
LINC00535-201ENST00000501400 AUHQ13825 339 aaKnown RBP18.88■□□□□ 0.61
LINC00535-201ENST00000501400 KCNJ11Q14654 390 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 HIF1AQ16665 826 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 LONRF1Q17RB8 773 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 MSS51Q4VC12 460 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 FNBP1LQ5T0N5 605 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 KCNT2Q6UVM3 1135 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 FAM43BQ6ZT52 329 aaPredicted RBP18.88■□□□□ 0.61
LINC00535-201ENST00000501400 BEND5Q7L4P6 421 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 DCP1BQ8IZD4 617 aaKnown RBP18.88■□□□□ 0.61
LINC00535-201ENST00000501400 TTC9BQ8N6N2 239 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 DIS3LQ8TF46 1054 aaKnown RBP18.88■□□□□ 0.61
LINC00535-201ENST00000501400 BCL7CQ8WUZ0 217 aaPredicted RBP18.88■□□□□ 0.61
LINC00535-201ENST00000501400 VWCEQ96DN2 955 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 FUBP3Q96I24 572 aaKnown RBP eCLIP18.88■□□□□ 0.61
LINC00535-201ENST00000501400 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.88■□□□□ 0.61
LINC00535-201ENST00000501400 SF3B1O75533 1304 aaKnown RBP eCLIP18.88■□□□□ 0.61
LINC00535-201ENST00000501400 RASGRF2O14827 1237 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 DCLK1O15075 740 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 CREB3O43889 395 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 VAV1P15498 845 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 CAPN2P17655 700 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 IFRD2Q12894 506 aaPredicted RBP18.88■□□□□ 0.61
LINC00535-201ENST00000501400 CTXN3Q4LDR2 81 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 MFSD5Q6N075 450 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 RFX8Q6ZV50 586 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 SCD5Q86SK9 330 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 CEP57Q86XR8 500 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 SCN4BQ8IWT1 228 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 ROPN1BQ9BZX4 212 aaPredicted RBP18.88■□□□□ 0.61
LINC00535-201ENST00000501400 ROPN1Q9HAT0 212 aaPredicted RBP18.88■□□□□ 0.61
LINC00535-201ENST00000501400 PAK5Q9P286 719 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 SLC12A6Q9UHW9 1150 aa18.88■□□□□ 0.61
LINC00535-201ENST00000501400 LTBP2Q14767 1821 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 TBKBP1A7MCY6 615 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 NT5C1B-RDH14C9J2C7 533 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 E7ESA3 106 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 EEF2KO00418 725 aaKnown RBP18.87■□□□□ 0.61
LINC00535-201ENST00000501400 ALOX15BO15296 676 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 HOXA2O43364 376 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 GALTP07902 379 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 YWHAGP61981 247 aaKnown RBP eCLIP18.87■□□□□ 0.61
LINC00535-201ENST00000501400 PDIA2Q13087 525 aaKnown RBP18.87■□□□□ 0.61
LINC00535-201ENST00000501400 NFE2Q16621 373 aaPredicted RBP18.87■□□□□ 0.61
LINC00535-201ENST00000501400 SKIDA1Q1XH10 827 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 HP1BP3Q5SSJ5 553 aaPredicted RBP18.87■□□□□ 0.61
LINC00535-201ENST00000501400 SDHAF4Q5VUM1 108 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 FUT10Q6P4F1 479 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 CENPUQ71F23 418 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 DEFB128Q7Z7B8 93 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 CCDC13Q8IYE1 715 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 NETO2Q8NC67 525 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 PGLYRP2Q96PD5 576 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 CAPS2Q9BXY5 557 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 MRPL9Q9BYD2 267 aaKnown RBP18.87■□□□□ 0.61
LINC00535-201ENST00000501400 XPO7Q9UIA9 1087 aaKnown RBP18.87■□□□□ 0.61
LINC00535-201ENST00000501400 TBX21Q9UL17 535 aa18.87■□□□□ 0.61
LINC00535-201ENST00000501400 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.87■□□□□ 0.61
LINC00535-201ENST00000501400 GREB1Q4ZG55 1949 aa18.86■□□□□ 0.61
LINC00535-201ENST00000501400 TCEA3O75764 348 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms