RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 MARCOQ9UEW3 520 aaPredicted RBP16.96■□□□□ 0.31
COL6A1-206ENST00000498614 CXorf49A8MYA2 514 aaPredicted RBP16.96■□□□□ 0.31
COL6A1-206ENST00000498614 TM7SF2O76062 418 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 RTN3O95197 1032 aaPredicted RBP16.96■□□□□ 0.31
COL6A1-206ENST00000498614 C1QAP02745 245 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 HMGCRP04035 888 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 P4HA1P13674 534 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 GPD1P21695 349 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 ATICP31939 592 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 TMPRSS15P98073 1019 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 DARS2Q6PI48 645 aaKnown RBP16.96■□□□□ 0.31
COL6A1-206ENST00000498614 ARMCX2Q7L311 632 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 CTAGE3PQ8IX95 158 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 C12orf29Q8N999 325 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 C7orf26Q96N11 449 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 NR1H4Q96RI1 486 aaPredicted RBP16.96■□□□□ 0.31
COL6A1-206ENST00000498614 PARK7Q99497 189 aaKnown RBP16.96■□□□□ 0.31
COL6A1-206ENST00000498614 RSAD1Q9HA92 442 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 CYP3A43Q9HB55 503 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 PDP2Q9P2J9 529 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 SLC7A8Q9UHI5 535 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 TSPAN16Q9UKR8 245 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 CYB561D2O14569 222 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 BAG2O95816 211 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 PDGFRAP16234 1089 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 RGS7P49802 495 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 ZNF143P52747 638 aaPredicted RBP16.95■□□□□ 0.3
COL6A1-206ENST00000498614 ACTR3P61158 418 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 MRPS5P82675 430 aaKnown RBP16.95■□□□□ 0.3
COL6A1-206ENST00000498614 ROR1Q01973 937 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 KCNJ11Q14654 390 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 FAM187BQ17R55 369 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 ZNF484Q5JVG2 852 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 TTC39BQ5VTQ0 682 aaPredicted RBP16.95■□□□□ 0.3
COL6A1-206ENST00000498614 C1orf228Q6PIY5 440 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 CYP4V2Q6ZWL3 525 aaPredicted RBP16.95■□□□□ 0.3
COL6A1-206ENST00000498614 SLC26A11Q86WA9 606 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 SLC25A41Q8N5S1 370 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 SHKBP1Q8TBC3 707 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 TUBGCP5Q96RT8 1024 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 TTC1Q99614 292 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 ECSITQ9BQ95 431 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 ZCWPW1Q9H0M4 648 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 ASB7Q9H672 318 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 TAGLN3Q9UI15 199 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 PPM1HQ9ULR3 514 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 BARX2Q9UMQ3 279 aaPredicted RBP16.95■□□□□ 0.3
COL6A1-206ENST00000498614 SLC45A1Q9Y2W3 748 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 PLLPQ9Y342 182 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 TTLL3Q9Y4R7 772 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 SPECC1L-ADORA2AF8WAN1 911 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 CIB2O75838 187 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 AQP5P55064 265 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 DSG1Q02413 1049 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 CHI3L2Q15782 390 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 DEFB115Q30KQ5 88 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 TRMT5Q32P41 509 aaKnown RBP16.95■□□□□ 0.3
COL6A1-206ENST00000498614 NLRP7Q8WX94 980 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 E2F7Q96AV8 911 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 SLC13A1Q9BZW2 595 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 VRTNQ9H8Y1 702 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 GPATCH2LQ9NWQ4 482 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 DPP3Q9NY33 737 aa16.95■□□□□ 0.3
COL6A1-206ENST00000498614 ZSWIM8A7E2V4 1837 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 C2CD4BA6NLJ0 364 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 UGT1A9O60656 530 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 ALDH18A1P54886 795 aaKnown RBP16.94■□□□□ 0.3
COL6A1-206ENST00000498614 BMPR2Q13873 1038 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 ACAP1Q15027 740 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 TEX44Q53QW1 395 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 EGFL6Q8IUX8 553 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 RNF217Q8TC41 542 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 CNPY3Q9BT09 278 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 CCDC106Q9BWC9 280 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 C20orf27Q9GZN8 174 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 UGT1A7Q9HAW7 530 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 UGT1A10Q9HAW8 530 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 UGT1A8Q9HAW9 530 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 PCMTD2Q9NV79 361 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 NDE1Q9NXR1 346 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 A0A1B0GVG6 124 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 PRR5-ARHGAP8B1AHC4 643 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 H7C0C1 242 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 ATP5OP48047 213 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 RPS6KA3P51812 740 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 ARHGAP8P85298 464 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 NOMO1Q15155 1222 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 C1orf146Q5VVC0 180 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 SCYL2Q6P3W7 929 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 LINC01465Q8N7H1 131 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 FAM192AQ9GZU8 254 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 WWP1Q9H0M0 922 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 CXCL16Q9H2A7 254 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 MROH8Q9H579 483 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 SIRPGQ9P1W8 387 aa16.94■□□□□ 0.3
COL6A1-206ENST00000498614 MEI4A8MW99 385 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 PRPSAP2O60256 369 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 RFPL1O75677 317 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 MAP3K6O95382 1288 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 PFKMP08237 780 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms