RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 CUTAO60888 179 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 DKK1O94907 266 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 RPN1P04843 607 aaKnown RBP15.44■□□□□ 0.06
TRAF4-212ENST00000498540 HMBSP08397 361 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 OXTRP30559 389 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 CORO1AP31146 461 aaKnown RBP15.44■□□□□ 0.06
TRAF4-212ENST00000498540 PIK3CAP42336 1068 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 AFMP43652 599 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 ZNF132P52740 706 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 INCA1Q0VD86 236 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 C1orf220Q5T0J3 134 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 IL27RAQ6UWB1 636 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 SV2AQ7L0J3 742 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 TMPRSS7Q7RTY8 843 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 CCDC186Q7Z3E2 898 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 ANKS1BQ7Z6G8 1248 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 FAM124AQ86V42 546 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 GRAMD1CQ8IYS0 662 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 RBBP8NLQ8NC74 664 aaPredicted RBP15.44■□□□□ 0.06
TRAF4-212ENST00000498540 GOLGA5Q8TBA6 731 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 PRCCQ92733 491 aaPredicted RBP15.44■□□□□ 0.06
TRAF4-212ENST00000498540 TAF4BQ92750 862 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 RASAL2Q9UJF2 1139 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 BTBD3Q9Y2F9 522 aa15.44■□□□□ 0.06
TRAF4-212ENST00000498540 KNL1Q8NG31 2342 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 GOLGA8CPA6NN73 597 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 FLRT2O43155 660 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 HLA-DRAP01903 254 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 CHKAP35790 457 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 CSNK1EP49674 416 aaKnown RBP15.43■□□□□ 0.06
TRAF4-212ENST00000498540 EFEMP1Q12805 493 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 TMEM215Q68D42 235 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 DBX2Q6ZNG2 339 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 SLC9A9Q8IVB4 645 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 KIAA0895Q8NCT3 520 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 RHBDD1Q8TEB9 315 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 UCMAQ8WVF2 138 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 SNX19Q92543 992 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 LRIG1Q96JA1 1093 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 NUP58Q9BVL2 599 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 APOBEC3GQ9HC16 384 aaKnown RBP15.43■□□□□ 0.06
TRAF4-212ENST00000498540 ELOVL2Q9NXB9 296 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 AGO1Q9UL18 857 aaKnown RBP15.43■□□□□ 0.06
TRAF4-212ENST00000498540 ZNF510Q9Y2H8 683 aa15.43■□□□□ 0.06
TRAF4-212ENST00000498540 TP53BP1Q12888 1972 aaPredicted RBP15.43■□□□□ 0.06
TRAF4-212ENST00000498540 GOLGA4Q13439 2230 aaKnown RBP15.42■□□□□ 0.06
TRAF4-212ENST00000498540 CABIN1Q9Y6J0 2220 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 KLRC4O43908 158 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 KIF20AO95235 890 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 YEATS4O95619 227 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 EPHX1P07099 455 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 RALAP11233 206 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 ACADMP11310 421 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 PSEN1P49768 467 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 STK4Q13043 487 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 TADA2BQ86TJ2 420 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 DENND1CQ8IV53 801 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 ZNF276Q8N554 614 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 TMC2Q8TDI7 906 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 INTS4Q96HW7 963 aaKnown RBP15.42■□□□□ 0.06
TRAF4-212ENST00000498540 NT5C1AQ9BXI3 368 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 BACH2Q9BYV9 841 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 CIPCQ9C0C6 399 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 KCTD10Q9H3F6 313 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 C6orf106Q9H6K1 298 aaPredicted RBP15.42■□□□□ 0.06
TRAF4-212ENST00000498540 SCUBE2Q9NQ36 999 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 CLIC5Q9NZA1 410 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 DKK4Q9UBT3 224 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 PCDHGB2Q9Y5G2 931 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 USP3Q9Y6I4 520 aa15.42■□□□□ 0.06
TRAF4-212ENST00000498540 URB1O60287 2271 aaKnown RBP15.42■□□□□ 0.06
TRAF4-212ENST00000498540 NR3C1P04150 777 aa15.41■□□□□ 0.06
TRAF4-212ENST00000498540 HLA-EP13747 358 aa15.41■□□□□ 0.06
TRAF4-212ENST00000498540 CD58P19256 250 aa15.41■□□□□ 0.06
TRAF4-212ENST00000498540 TRIM21P19474 475 aaKnown RBP15.41■□□□□ 0.06
TRAF4-212ENST00000498540 AFF3P51826 1226 aaKnown RBP15.41■□□□□ 0.06
TRAF4-212ENST00000498540 COG7P83436 770 aa15.41■□□□□ 0.06
TRAF4-212ENST00000498540 EIF4HQ15056 248 aaKnown RBP15.41■□□□□ 0.06
TRAF4-212ENST00000498540 KIF19Q2TAC6 998 aa15.41■□□□□ 0.06
TRAF4-212ENST00000498540 PPP1R26Q5T8A7 1209 aaPredicted RBP15.41■□□□□ 0.06
TRAF4-212ENST00000498540 LAYNQ6UX15 382 aa15.41■□□□□ 0.06
TRAF4-212ENST00000498540 SERPINA13PQ6UXR4 307 aa15.41■□□□□ 0.06
TRAF4-212ENST00000498540 TMEM174Q8WUU8 243 aa15.41■□□□□ 0.06
TRAF4-212ENST00000498540 ZNF396Q96N95 335 aaPredicted RBP15.41■□□□□ 0.06
TRAF4-212ENST00000498540 CDK5RAP1Q96SZ6 601 aaKnown RBP15.41■□□□□ 0.06
TRAF4-212ENST00000498540 CDC6Q99741 560 aa15.41■□□□□ 0.06
TRAF4-212ENST00000498540 DUSP16Q9BY84 665 aa15.41■□□□□ 0.06
TRAF4-212ENST00000498540 DCLK3Q9C098 648 aa15.41■□□□□ 0.06
TRAF4-212ENST00000498540 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.41■□□□□ 0.06
TRAF4-212ENST00000498540 SNX11Q9Y5W9 270 aa15.41■□□□□ 0.06
TRAF4-212ENST00000498540 BPTFQ12830 3046 aa15.4■□□□□ 0.06
TRAF4-212ENST00000498540 FAM149AA5PLN7 773 aa15.4■□□□□ 0.06
TRAF4-212ENST00000498540 TRABD2BA6NFA1 517 aa15.4■□□□□ 0.06
TRAF4-212ENST00000498540 IKBKBO14920 756 aa15.4■□□□□ 0.06
TRAF4-212ENST00000498540 CYBBP04839 570 aa15.4■□□□□ 0.06
TRAF4-212ENST00000498540 ACSL1P33121 698 aa15.4■□□□□ 0.06
TRAF4-212ENST00000498540 CYP4F3Q08477 520 aa15.4■□□□□ 0.06
TRAF4-212ENST00000498540 CAMK2BQ13554 666 aa15.4■□□□□ 0.06
TRAF4-212ENST00000498540 CEP135Q66GS9 1140 aa15.4■□□□□ 0.06
TRAF4-212ENST00000498540 CPXM2Q8N436 756 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms