RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 PASD1Q8IV76 773 aa19.19■□□□□ 0.66
HOXD11-202ENST00000498438 FAM160A2Q8N612 972 aaPredicted RBP19.19■□□□□ 0.66
HOXD11-202ENST00000498438 MDGA1Q8NFP4 955 aa19.19■□□□□ 0.66
HOXD11-202ENST00000498438 KCNV2Q8TDN2 545 aa19.19■□□□□ 0.66
HOXD11-202ENST00000498438 FAM149B1Q96BN6 582 aa19.19■□□□□ 0.66
HOXD11-202ENST00000498438 TPSD1Q9BZJ3 242 aa19.19■□□□□ 0.66
HOXD11-202ENST00000498438 FBXO10Q9UK96 956 aa19.19■□□□□ 0.66
HOXD11-202ENST00000498438 FHOD1Q9Y613 1164 aa19.19■□□□□ 0.66
HOXD11-202ENST00000498438 RALGAPA1Q6GYQ0 2036 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 PRRT4C9JH25 899 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 FOXN3O00409 490 aaPredicted RBP19.18■□□□□ 0.66
HOXD11-202ENST00000498438 PAPSS1O43252 624 aaPredicted RBP19.18■□□□□ 0.66
HOXD11-202ENST00000498438 IGLV3-27P01718 113 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 CYBBP04839 570 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 FYNP06241 537 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 RETP07949 1114 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 NCAM1P13591 858 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 PTK2Q05397 1052 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 RAPGEF1Q13905 1077 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 STX1AQ16623 288 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 CCDC183Q5T5S1 534 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 SMYD5Q6GMV2 418 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 CACNA2D4Q7Z3S7 1137 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 TRMT11Q7Z4G4 463 aaKnown RBP19.18■□□□□ 0.66
HOXD11-202ENST00000498438 KBTBD6Q86V97 674 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 DQX1Q8TE96 717 aaKnown RBP19.18■□□□□ 0.66
HOXD11-202ENST00000498438 LSM14BQ9BX40 385 aaKnown RBP19.18■□□□□ 0.66
HOXD11-202ENST00000498438 ANO10Q9NW15 660 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 TJP2Q9UDY2 1190 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 PCDHGC3Q9UN70 934 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 STARD13Q9Y3M8 1113 aa19.18■□□□□ 0.66
HOXD11-202ENST00000498438 DCLK1O15075 740 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 ALDH1A2O94788 518 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 LATS1O95835 1130 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 CLCN1P35523 988 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 SPEM2Q0P670 501 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 KRT31Q15323 416 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 KLHDC7AQ5VTJ3 777 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 TMEM110Q86TL2 294 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 SLC47A2Q86VL8 602 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 FAM71AQ8IYT1 594 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 DDI1Q8WTU0 396 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 POLMQ9NP87 494 aaPredicted RBP19.17■□□□□ 0.66
HOXD11-202ENST00000498438 PARD6AQ9NPB6 346 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 STOML2Q9UJZ1 356 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 CLEC4EQ9ULY5 219 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 USP18Q9UMW8 372 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 NAALADL1Q9UQQ1 740 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 SLC27A6Q9Y2P4 619 aa19.17■□□□□ 0.66
HOXD11-202ENST00000498438 TCRBV21S2A2A0A5A6 115 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 TSPAN3O60637 253 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 TGM1P22735 817 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 NTSR1P30989 418 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 WASP42768 502 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 TBX4P57082 545 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 DRAP1Q14919 205 aaPredicted RBP19.16■□□□□ 0.66
HOXD11-202ENST00000498438 ADGRF1Q5T601 910 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 NUGGCQ68CJ6 796 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 WDTC1Q8N5D0 677 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 GPR161Q8N6U8 529 aaKnown RBP19.16■□□□□ 0.66
HOXD11-202ENST00000498438 C1orf131Q8NDD1 294 aaKnown RBP19.16■□□□□ 0.66
HOXD11-202ENST00000498438 HMGB4Q8WW32 186 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 PIWIL1Q96J94 861 aaKnown RBP19.16■□□□□ 0.66
HOXD11-202ENST00000498438 SERPINB11Q96P15 392 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 CPXM1Q96SM3 734 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 ACOX2Q99424 681 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 TRIM62Q9BVG3 475 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 VPS16Q9H269 839 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 FANCLQ9NW38 375 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 INVSQ9Y283 1065 aa19.16■□□□□ 0.66
HOXD11-202ENST00000498438 ABCA7Q8IZY2 2146 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 DCHS1Q96JQ0 3298 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 GFRA2O00451 464 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 CAPN9O14815 690 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 HOXB2P14652 356 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 UCHL3P15374 230 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 HOXD9P28356 352 aaPredicted RBP19.15■□□□□ 0.66
HOXD11-202ENST00000498438 KRT9P35527 623 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 ZNF445P59923 1031 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 MYL5Q02045 173 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 RING1Q06587 406 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 GEN1Q17RS7 908 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 PLK5Q496M5 336 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 MPPE1Q53F39 396 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 USP39Q53GS9 565 aaKnown RBP19.15■□□□□ 0.66
HOXD11-202ENST00000498438 SYPL2Q5VXT5 272 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 ANKS1BQ7Z6G8 1248 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 TAC4Q86UU9 113 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 UNC45BQ8IWX7 931 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 CHPFQ8IZ52 775 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 ADAM32Q8TC27 787 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 PPP1R13BQ96KQ4 1090 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 NAA15Q9BXJ9 866 aaKnown RBP19.15■□□□□ 0.66
HOXD11-202ENST00000498438 LHX5Q9H2C1 402 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 POPDC2Q9HBU9 364 aa19.15■□□□□ 0.66
HOXD11-202ENST00000498438 BCCIPQ9P287 314 aaKnown RBP eCLIP19.15■□□□□ 0.66
HOXD11-202ENST00000498438 LRP3O75074 770 aa19.14■□□□□ 0.65
HOXD11-202ENST00000498438 TPM2P07951 284 aa19.14■□□□□ 0.65
HOXD11-202ENST00000498438 SLC11A2P49281 568 aa19.14■□□□□ 0.65
HOXD11-202ENST00000498438 SGSHP51688 502 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms