RNA–Protein interactions for RNA: ENST00000497816.1

IVD-209, Transcript of isovaleryl-CoA dehydrogenase, human

TSL 1 (best)

Gene IVD, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IVD-209	ENST00000497816	LTF	P02788	710 aa		15.25	■□□□□ 0.03
IVD-209	ENST00000497816	MAN2A1	Q16706	1144 aa		15.25	■□□□□ 0.03
IVD-209	ENST00000497816	MIIP	Q5JXC2	388 aa		15.25	■□□□□ 0.03
IVD-209	ENST00000497816	ZNF606	Q8WXB4	792 aa		15.25	■□□□□ 0.03
IVD-209	ENST00000497816	SHC3	Q92529	594 aa		15.25	■□□□□ 0.03
IVD-209	ENST00000497816	ACOX2	Q99424	681 aa		15.25	■□□□□ 0.03
IVD-209	ENST00000497816	POLM	Q9NP87	494 aa	Predicted RBP	15.25	■□□□□ 0.03
IVD-209	ENST00000497816	STOML2	Q9UJZ1	356 aa		15.25	■□□□□ 0.03
IVD-209	ENST00000497816	AJAP1	Q9UKB5	411 aa	Predicted RBP	15.25	■□□□□ 0.03
IVD-209	ENST00000497816	INVS	Q9Y283	1065 aa		15.25	■□□□□ 0.03
IVD-209	ENST00000497816	SLC27A6	Q9Y2P4	619 aa		15.25	■□□□□ 0.03
IVD-209	ENST00000497816	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	15.25	■□□□□ 0.03
IVD-209	ENST00000497816	PRR5-ARHGAP8	B1AHC4	643 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	GFRA2	O00451	464 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	ALDH1A2	O94788	518 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	IGLV3-27	P01718	113 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	FYN	P06241	537 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	GNA15	P30679	374 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	NTSR1	P30989	418 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	HARS2	P49590	506 aa	Known RBP	15.24	■□□□□ 0.03
IVD-209	ENST00000497816	ARHGAP8	P85298	464 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	PUM1	Q14671	1186 aa	Known RBP eCLIP	15.24	■□□□□ 0.03
IVD-209	ENST00000497816	ARHGAP44	Q17R89	818 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	USP39	Q53GS9	565 aa	Known RBP	15.24	■□□□□ 0.03
IVD-209	ENST00000497816	PRR23C	Q6ZRP0	262 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	FAM114A1	Q8IWE2	563 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	STK32A	Q8WU08	396 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	SLC4A5	Q9BY07	1137 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	MIS12	Q9H081	205 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	ARRDC1-AS1	Q9H2J1	176 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	CD248	Q9HCU0	757 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	DACH1	Q9UI36	760 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	CYTH4	Q9UIA0	394 aa		15.24	■□□□□ 0.03
IVD-209	ENST00000497816	PI4KA	P42356	2102 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816		A0A1W2PQF6	199 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	TCRBV21S2A2	A0A5A6	115 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	THAP12	O43422	761 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	MED7	O43513	233 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	LATS1	O95835	1130 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	HOXB2	P14652	356 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	BCKDHB	P21953	392 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	WAS	P42768	502 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	ELF2	Q15723	593 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	HSP90AA4P	Q58FG1	418 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	PLA2G2C	Q5R387	149 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	PMS2CL	Q68D20	193 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	DPY19L2P1	Q6NXN4	242 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	ERMP1	Q7Z2K6	904 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	SCUBE3	Q8IX30	993 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	HMGB4	Q8WW32	186 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	PIWIL1	Q96J94	861 aa	Known RBP	15.23	■□□□□ 0.03
IVD-209	ENST00000497816	GABRG3	Q99928	467 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	TUBGCP2	Q9BSJ2	902 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	NDST4	Q9H3R1	872 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	ST7	Q9NRC1	585 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	CLEC4E	Q9ULY5	219 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	PCDHGA5	Q9Y5G8	931 aa		15.23	■□□□□ 0.03
IVD-209	ENST00000497816	RHOBTB1	O94844	696 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	CYBB	P04839	570 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	HOXD9	P28356	352 aa	Predicted RBP	15.22	■□□□□ 0.03
IVD-209	ENST00000497816	P2RY2	P41231	377 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	ACADSB	P45954	432 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	CCDC6	Q16204	474 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	GEN1	Q17RS7	908 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	VWA3B	Q502W6	1294 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	CT47A1	Q5JQC4	288 aa	Predicted RBP	15.22	■□□□□ 0.03
IVD-209	ENST00000497816	SMYD5	Q6GMV2	418 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	RBM43	Q6ZSC3	357 aa	Known RBP	15.22	■□□□□ 0.03
IVD-209	ENST00000497816	C11orf74	Q86VG3	221 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	CHPF	Q8IZ52	775 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816		E5RJQ4	531 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	PAPSS1	O43252	624 aa	Predicted RBP	15.22	■□□□□ 0.03
IVD-209	ENST00000497816	SART1	O43290	800 aa	Known RBP	15.22	■□□□□ 0.03
IVD-209	ENST00000497816	ZNF806	P0C7X5	589 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	NCAM1	P13591	858 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	PRKCSH	P14314	528 aa	Predicted RBP	15.22	■□□□□ 0.03
IVD-209	ENST00000497816	GABRG2	P18507	467 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	GBP1	P32455	592 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	MPL	P40238	635 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	USP8	P40818	1118 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	RING1	Q06587	406 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	MAP7D1	Q3KQU3	841 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	ADGRF1	Q5T601	910 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	KIAA1211L	Q6NV74	962 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	BEND5	Q7L4P6	421 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	TMEM110	Q86TL2	294 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	DQX1	Q8TE96	717 aa	Known RBP	15.22	■□□□□ 0.03
IVD-209	ENST00000497816	DDI1	Q8WTU0	396 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	RLN3	Q8WXF3	142 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	GOLGA1	Q92805	767 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	SLC2A11	Q9BYW1	496 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	SAMSN1	Q9NSI8	373 aa	Known RBP	15.22	■□□□□ 0.03
IVD-209	ENST00000497816	CACNA2D2	Q9NY47	1150 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	BCCIP	Q9P287	314 aa	Known RBP eCLIP	15.22	■□□□□ 0.03
IVD-209	ENST00000497816	DNAJC12	Q9UKB3	198 aa		15.22	■□□□□ 0.03
IVD-209	ENST00000497816	CDV3	Q9UKY7	258 aa	Known RBP	15.22	■□□□□ 0.03
IVD-209	ENST00000497816	KCNJ18	B7U540	433 aa		15.21	■□□□□ 0.03
IVD-209	ENST00000497816	FOXD2	O60548	495 aa	Predicted RBP	15.21	■□□□□ 0.03
IVD-209	ENST00000497816	TSPAN3	O60637	253 aa		15.21	■□□□□ 0.03
IVD-209	ENST00000497816	SDHB	P21912	280 aa		15.21	■□□□□ 0.03

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms