RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 Q6ZS52 159 aa12.23□□□□□ -0.45
MRPL55-234ENST00000497758 NUDT18Q6ZVK8 323 aa12.23□□□□□ -0.45
MRPL55-234ENST00000497758 SLC26A9Q7LBE3 791 aa12.23□□□□□ -0.45
MRPL55-234ENST00000497758 TAC4Q86UU9 113 aa12.23□□□□□ -0.45
MRPL55-234ENST00000497758 SPEM1Q8N4L4 309 aa12.23□□□□□ -0.45
MRPL55-234ENST00000497758 RNF214Q8ND24 703 aa12.23□□□□□ -0.45
MRPL55-234ENST00000497758 ADAM32Q8TC27 787 aa12.23□□□□□ -0.45
MRPL55-234ENST00000497758 NUP58Q9BVL2 599 aa12.23□□□□□ -0.45
MRPL55-234ENST00000497758 FBRSL1Q9HCM7 1045 aaKnown RBP12.23□□□□□ -0.45
MRPL55-234ENST00000497758 DNAJC17Q9NVM6 304 aaKnown RBP12.23□□□□□ -0.45
MRPL55-234ENST00000497758 MARK1Q9P0L2 795 aa12.23□□□□□ -0.45
MRPL55-234ENST00000497758 IFNKQ9P0W0 207 aa12.23□□□□□ -0.45
MRPL55-234ENST00000497758 TLR6Q9Y2C9 796 aa12.23□□□□□ -0.45
MRPL55-234ENST00000497758 VPS13AQ96RL7 3174 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 LRRC53A6NM62 1247 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 GOLGA8SH3BPF8 625 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 CBFA2T2O43439 604 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 RNF40O75150 1001 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 TULP3O75386 442 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 DAB1O75553 588 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 KAT7O95251 611 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 TRUB2O95900 331 aaKnown RBP12.22□□□□□ -0.45
MRPL55-234ENST00000497758 APOEP02649 317 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 CHRNB2P17787 502 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 GBP1P32455 592 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 GRIA2P42262 883 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 GABRB2P47870 512 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 CXCL12P48061 93 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 SLC6A11P48066 632 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 ZNF445P59923 1031 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 RNASE9P60153 205 aaKnown RBP12.22□□□□□ -0.45
MRPL55-234ENST00000497758 CSTF1Q05048 431 aaKnown RBP12.22□□□□□ -0.45
MRPL55-234ENST00000497758 ADGRF1Q5T601 910 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 SFMBT2Q5VUG0 894 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 MMS22LQ6ZRQ5 1243 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 C12orf40Q86WS4 652 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 DEFB106AQ8N104 65 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 CPXM2Q8N436 756 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 ZNF397Q8NF99 534 aaPredicted RBP12.22□□□□□ -0.45
MRPL55-234ENST00000497758 DDI1Q8WTU0 396 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 BAP1Q92560 729 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 RNF34Q969K3 372 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 SLC2A13Q96QE2 648 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 AGPAT1Q99943 283 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 DDX50Q9BQ39 737 aaKnown RBP12.22□□□□□ -0.45
MRPL55-234ENST00000497758 EDEM3Q9BZQ6 932 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 DDIT4Q9NX09 232 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 FBXO4Q9UKT5 387 aa12.22□□□□□ -0.45
MRPL55-234ENST00000497758 CACNA1IQ9P0X4 2223 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 SYNJ2BP-COX16A0A087WUM0 186 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 TBC1D3BA6NDS4 549 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 IRAK2O43187 625 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 CACNG3O60359 315 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 MOCS2O96007 188 aaPredicted RBP12.21□□□□□ -0.45
MRPL55-234ENST00000497758 IGLV3-27P01718 113 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 CYP1A1P04798 512 aaPredicted RBP12.21□□□□□ -0.45
MRPL55-234ENST00000497758 SLC2A3P11169 496 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 SCNN1AP37088 669 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 SEC13P55735 322 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 CLEC16AQ2KHT3 1053 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 MPPE1Q53F39 396 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 C2CD6Q53TS8 623 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 FIGNQ5HY92 759 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 MAMSTRQ6ZN01 415 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 XYLT1Q86Y38 959 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 ETFBKMTQ8IXQ9 262 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 SLC30A5Q8TAD4 765 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 ACDQ96AP0 544 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 IQCDQ96DY2 449 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 FCRL2Q96LA5 508 aaPredicted RBP12.21□□□□□ -0.45
MRPL55-234ENST00000497758 C11orf70Q9BRQ4 267 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 PRMT8Q9NR22 394 aaPredicted RBP12.21□□□□□ -0.45
MRPL55-234ENST00000497758 RRN3Q9NYV6 651 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 PLK2Q9NYY3 685 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.21□□□□□ -0.45
MRPL55-234ENST00000497758 COX16Q9P0S2 106 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 SLC12A6Q9UHW9 1150 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 STAP1Q9ULZ2 295 aa12.21□□□□□ -0.45
MRPL55-234ENST00000497758 WDR87Q6ZQQ6 2873 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 TYW5A2RUC4 315 aaKnown RBP12.2□□□□□ -0.46
MRPL55-234ENST00000497758 ACSL4O60488 711 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 TSPAN3O60637 253 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 PENKP01210 267 aaPredicted RBP12.2□□□□□ -0.46
MRPL55-234ENST00000497758 CALB1P05937 261 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 SP9P0CG40 484 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 ABCB4P21439 1286 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 TNFAIP3P21580 790 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 MMP8P22894 467 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 CCR1P32246 355 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 NOS2P35228 1153 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 MATKP42679 507 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 TNFRSF4P43489 277 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 DGKGP49619 791 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 SATB1Q01826 763 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 NHLH1Q02575 133 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 KLHL30Q0D2K2 578 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 NME3Q13232 169 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 GAS6Q14393 721 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 C2orf27AQ580R0 203 aa12.2□□□□□ -0.46
MRPL55-234ENST00000497758 ZC3H12AQ5D1E8 599 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms