RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 ATG13O75143 517 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 TULP3O75386 442 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 KAT7O95251 611 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 LTFP02788 710 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 SKILP12757 684 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 PDCLQ13371 301 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 RAPGEF1Q13905 1077 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 SYCP1Q15431 976 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 ANO4Q32M45 955 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 TPGS1Q6ZTW0 290 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 DENND1CQ8IV53 801 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 FAM217AQ8IXS0 508 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 USP33Q8TEY7 942 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 RNF139Q8WU17 664 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 NKD2Q969F2 451 aaPredicted RBP16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 PCMTD1Q96MG8 357 aaPredicted RBP16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 DCLK3Q9C098 648 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 NUCKS1Q9H1E3 243 aaKnown RBP16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 CAPN11Q9UMQ6 739 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 ZNF510Q9Y2H8 683 aa16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 HBS1LQ9Y450 684 aaKnown RBP16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 ZFHX2Q9C0A1 2572 aaPredicted RBP16.67■□□□□ 0.26
CTDSP1-214ENST00000497677 GPR179Q6PRD1 2367 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 GFRA2O00451 464 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 CCP110O43303 1012 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 MSI1O43347 362 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 ZNF500O60304 480 aaPredicted RBP16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 CACNG3O60359 315 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 GYPCP04921 128 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 TYRP14679 529 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 GRIA2P42262 883 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 KIR2DL1P43626 348 aaPredicted RBP16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 BPIFB4P59827 614 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 PPP2R5DQ14738 602 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 EMC10Q5UCC4 262 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 ZC3H14Q6PJT7 736 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 BEND5Q7L4P6 421 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 TC2NQ8N9U0 490 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 RPLP0P6Q8NHW5 317 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 KIAA1524Q8TCG1 905 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 ATRIPQ8WXE1 791 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 DDX1Q92499 740 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 PLD4Q96BZ4 506 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 CPXM1Q96SM3 734 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 ARHGEF4Q9NR80 690 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 WDR35Q9P2L0 1181 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 STOML2Q9UJZ1 356 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 FBXO10Q9UK96 956 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 HCN2Q9UL51 889 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 NAALADL1Q9UQQ1 740 aa16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 LUC7L2Q9Y383 392 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-214ENST00000497677 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 NEDD8-MDP1E9PL57 170 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 F8VZ95 297 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 ARHGAP6O43182 974 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 GFRA3O60609 400 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 PENKP01210 267 aaPredicted RBP16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 IGLV3-27P01718 113 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 CISD3P0C7P0 127 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 CYP11B1P15538 503 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 TNFRSF4P43489 277 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 NRLP54845 237 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 ZBED6P86452 979 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 CCZ1BP86790 482 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 CCZ1P86791 482 aaPredicted RBP16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 ARID5BQ14865 1188 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 FYB2Q5VWT5 728 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 SYPL2Q5VXT5 272 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 SYT13Q7L8C5 426 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 PASD1Q8IV76 773 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 SUMF1Q8NBK3 374 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 NEK11Q8NG66 645 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 PIWIL1Q96J94 861 aaKnown RBP16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 ZNF830Q96NB3 372 aaPredicted RBP16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 BAG1Q99933 345 aaPredicted RBP16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 BBS2Q9BXC9 721 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 KCND1Q9NSA2 647 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 DEC1Q9P2X7 70 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 USP34Q70CQ2 3546 aa16.65■□□□□ 0.26
CTDSP1-214ENST00000497677 SART1O43290 800 aaKnown RBP16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 LMNAP02545 664 aaKnown RBP16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 APODP05090 189 aa16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 NCAM1P13591 858 aa16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 FECHP22830 423 aa16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 CASP14P31944 242 aa16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 CDH5P33151 784 aaPredicted RBP16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 KRT9P35527 623 aa16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 CHKAP35790 457 aa16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 FNTBP49356 437 aa16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 JAM2P57087 298 aa16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 MRPS21P82921 87 aaKnown RBP16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 KDSRQ06136 332 aa16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 TAF5Q15542 800 aa16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 C2orf27AQ580R0 203 aa16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 CPXM2Q8N436 756 aa16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 C1orf131Q8NDD1 294 aaKnown RBP16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 OR8K1Q8NGG5 319 aa16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 CCDC26Q8TAB7 109 aa16.64■□□□□ 0.25
CTDSP1-214ENST00000497677 DQX1Q8TE96 717 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms