RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 HS2ST1Q7LGA3 356 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 APBB1IPQ7Z5R6 666 aaPredicted RBP8.26□□□□□ -1.09
VPS45-210ENST00000497638 NOSTRINQ8IVI9 506 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 TPH2Q8IWU9 490 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 BLIDQ8IZY5 108 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 APPL2Q8NEU8 664 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 BPIFB1Q8TDL5 484 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 EXOC4Q96A65 974 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 FCRL2Q96LA5 508 aaPredicted RBP8.26□□□□□ -1.09
VPS45-210ENST00000497638 LRRC3BQ96PB8 259 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 PLCD4Q9BRC7 762 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 SLC26A6Q9BXS9 759 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 TNFRSF10DQ9UBN6 386 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 GDAQ9Y2T3 454 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 URB1O60287 2271 aaKnown RBP8.26□□□□□ -1.09
VPS45-210ENST00000497638 ACKR2O00590 384 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 PODXLO00592 558 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 MARCH6O60337 910 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 ARL4AP40617 200 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 DPP6P42658 865 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 RARRES1P49788 294 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 IRX4P78413 519 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 CLCQ05315 142 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 NTRK3Q16288 839 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 INF2Q27J81 1249 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 USP39Q53GS9 565 aaKnown RBP8.25□□□□□ -1.09
VPS45-210ENST00000497638 STXBP5Q5T5C0 1151 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 PIP4P1Q86T03 277 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 MCPH1Q8NEM0 835 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 BEST2Q8NFU1 509 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 NAP1L4Q99733 375 aaKnown RBP8.25□□□□□ -1.09
VPS45-210ENST00000497638 CDADC1Q9BWV3 514 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 NUSAP1Q9BXS6 441 aaKnown RBP8.25□□□□□ -1.09
VPS45-210ENST00000497638 TOPORSQ9NS56 1045 aaPredicted RBP8.25□□□□□ -1.09
VPS45-210ENST00000497638 UBP1Q9NZI7 540 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 ASB3Q9Y575 518 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 NUB1Q9Y5A7 615 aa8.25□□□□□ -1.09
VPS45-210ENST00000497638 CELSR3Q9NYQ7 3312 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 SPTA1P02549 2419 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 SMIM28A0A1B0GU29 152 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 SPAARA0A1B0GVQ0 90 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 PATE3B3GLJ2 98 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 ABLIM1O14639 778 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 MEFVO15553 781 aaPredicted RBP8.24□□□□□ -1.09
VPS45-210ENST00000497638 USO1O60763 962 aaKnown RBP8.24□□□□□ -1.09
VPS45-210ENST00000497638 SLITRK3O94933 977 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 PRAMEF12O95522 483 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 EGFP01133 1207 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 MPOP05164 745 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 RPL9P32969 192 aaKnown RBP8.24□□□□□ -1.09
VPS45-210ENST00000497638 ALDH1A3P47895 512 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 ZNF165P49910 485 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 DGKEP52429 567 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 SCAPQ12770 1279 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 SEMA3BQ13214 749 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 RUNX3Q13761 415 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 HNRNPDQ14103 355 aaKnown RBP8.24□□□□□ -1.09
VPS45-210ENST00000497638 DMC1Q14565 340 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 TRIM61Q5EBN2 209 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 XKR4Q5GH76 650 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 GPR158Q5T848 1215 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 EEF1DP3Q658K8 133 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 GAREM2Q75VX8 874 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 NEK8Q86SG6 692 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 TSTD1Q8NFU3 115 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 CCDC26Q8TAB7 109 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 HAS1Q92839 578 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 BRF1Q92994 677 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 BBC3Q96PG8 261 aaPredicted RBP8.24□□□□□ -1.09
VPS45-210ENST00000497638 KCNC2Q96PR1 638 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 EIF2AK1Q9BQI3 630 aaKnown RBP8.24□□□□□ -1.09
VPS45-210ENST00000497638 CCDC113Q9H0I3 377 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 TASP1Q9H6P5 420 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 GFOD1Q9NXC2 390 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 GPR55Q9Y2T6 319 aaPredicted RBP8.24□□□□□ -1.09
VPS45-210ENST00000497638 KALRNO60229 2985 aa8.24□□□□□ -1.09
VPS45-210ENST00000497638 FADS2P1A8MWK0 482 aa8.23□□□□□ -1.09
VPS45-210ENST00000497638 BAG4O95429 457 aaKnown RBP8.23□□□□□ -1.09
VPS45-210ENST00000497638 XRCC6P12956 609 aaKnown RBP eCLIP8.23□□□□□ -1.09
VPS45-210ENST00000497638 NME1P15531 152 aaKnown RBP8.23□□□□□ -1.09
VPS45-210ENST00000497638 ENDOUP21128 410 aaKnown RBP8.23□□□□□ -1.09
VPS45-210ENST00000497638 GABRR2P28476 465 aa8.23□□□□□ -1.09
VPS45-210ENST00000497638 HOXD12P35452 270 aa8.23□□□□□ -1.09
VPS45-210ENST00000497638 DHPSP49366 369 aaPredicted RBP8.23□□□□□ -1.09
VPS45-210ENST00000497638 AFF3P51826 1226 aaKnown RBP8.23□□□□□ -1.09
VPS45-210ENST00000497638 NPY5RQ15761 445 aa8.23□□□□□ -1.09
VPS45-210ENST00000497638 ADCK5Q3MIX3 580 aa8.23□□□□□ -1.09
VPS45-210ENST00000497638 HSF5Q4G112 596 aaPredicted RBP8.23□□□□□ -1.09
VPS45-210ENST00000497638 ITIH5Q86UX2 942 aa8.23□□□□□ -1.09
VPS45-210ENST00000497638 FBXL16Q8N461 479 aa8.23□□□□□ -1.09
VPS45-210ENST00000497638 HDDC3Q8N4P3 179 aa8.23□□□□□ -1.09
VPS45-210ENST00000497638 CHCHD4Q8N4Q1 142 aa8.23□□□□□ -1.09
VPS45-210ENST00000497638 RPLP0P6Q8NHW5 317 aa8.23□□□□□ -1.09
VPS45-210ENST00000497638 PIGKQ92643 395 aa8.23□□□□□ -1.09
VPS45-210ENST00000497638 PSMG2Q969U7 264 aa8.23□□□□□ -1.09
VPS45-210ENST00000497638 CHFRQ96EP1 664 aa8.23□□□□□ -1.09
VPS45-210ENST00000497638 SLC6A18Q96N87 628 aa8.23□□□□□ -1.09
VPS45-210ENST00000497638 GCNAQ96QF7 691 aa8.23□□□□□ -1.09
VPS45-210ENST00000497638 P2RY13Q9BPV8 354 aa8.23□□□□□ -1.09
VPS45-210ENST00000497638 HSD17B14Q9BPX1 270 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms