RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 EMC1Q8N766 993 aa20.62■□□□□ 0.89
ACTN4-208ENST00000497637 URGCPQ8TCY9 931 aa20.62■□□□□ 0.89
ACTN4-208ENST00000497637 BCL7CQ8WUZ0 217 aaPredicted RBP20.62■□□□□ 0.89
ACTN4-208ENST00000497637 CASKIN2Q8WXE0 1202 aa20.62■□□□□ 0.89
ACTN4-208ENST00000497637 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.62■□□□□ 0.89
ACTN4-208ENST00000497637 SYT15Q9BQS2 421 aa20.62■□□□□ 0.89
ACTN4-208ENST00000497637 VN1R3Q9BXE9 311 aa20.62■□□□□ 0.89
ACTN4-208ENST00000497637 LRRC19Q9H756 370 aa20.62■□□□□ 0.89
ACTN4-208ENST00000497637 PIDD1Q9HB75 910 aa20.62■□□□□ 0.89
ACTN4-208ENST00000497637 KANSL3Q9P2N6 904 aa20.62■□□□□ 0.89
ACTN4-208ENST00000497637 AMACRQ9UHK6 382 aa20.62■□□□□ 0.89
ACTN4-208ENST00000497637 DSEQ9UL01 958 aa20.62■□□□□ 0.89
ACTN4-208ENST00000497637 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.61■□□□□ 0.89
ACTN4-208ENST00000497637 B3GAT3O94766 335 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 KRT7P08729 469 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 MYBL2P10244 700 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 TCF4P15884 667 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 PCSK1P29120 753 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 PCK1P35558 622 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 COILP38432 576 aaPredicted RBP20.61■□□□□ 0.89
ACTN4-208ENST00000497637 PTGIRP43119 386 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 FNTAP49354 379 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 PFKPQ01813 784 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 SLC25A11Q02978 314 aaKnown RBP20.61■□□□□ 0.89
ACTN4-208ENST00000497637 DSC1Q08554 894 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 MLF2Q15773 248 aaPredicted RBP20.61■□□□□ 0.89
ACTN4-208ENST00000497637 PAQR9Q6ZVX9 377 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 ARCQ7LC44 396 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 CELF5Q8N6W0 485 aaKnown RBP20.61■□□□□ 0.89
ACTN4-208ENST00000497637 RXFP2Q8WXD0 754 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 SEC14L1Q92503 715 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 SLITRK1Q96PX8 696 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 NCAPGQ9BPX3 1015 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 PAAF1Q9BRP4 392 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 B3GNT5Q9BYG0 378 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 OSBPL8Q9BZF1 889 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 PLEKHA4Q9H4M7 779 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 CRTAC1Q9NQ79 661 aa20.61■□□□□ 0.89
ACTN4-208ENST00000497637 LRCH4O75427 683 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 RNF8O76064 485 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 KRT1P04264 644 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 URODP06132 367 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 RETP07949 1114 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 PDGFRAP16234 1089 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 TYMPP19971 482 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 ACAT1P24752 427 aaKnown RBP20.6■□□□□ 0.89
ACTN4-208ENST00000497637 GJC1P36383 396 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 SLC11A1P49279 550 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 SLC8A3P57103 927 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 DR1Q01658 176 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 SPEM2Q0P670 501 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 KLF1Q13351 362 aaPredicted RBP20.6■□□□□ 0.89
ACTN4-208ENST00000497637 NNTQ13423 1086 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 CUL1Q13616 776 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 ATP13A4Q4VNC1 1196 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 SLC44A4Q53GD3 710 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 MDH1BQ5I0G3 518 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 KCTD13Q8WZ19 329 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 CLDN23Q96B33 292 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 SUSD3Q96L08 255 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 HOMER3Q9NSC5 361 aa20.6■□□□□ 0.89
ACTN4-208ENST00000497637 C2orf16Q68DN1 1984 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 TMEM189-UBE2V1I3L0A0 370 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 PIK3R2O00459 728 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 TTI1O43156 1089 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 SASH3O75995 380 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 TRUB2O95900 331 aaKnown RBP20.59■□□□□ 0.89
ACTN4-208ENST00000497637 ALDH2P05091 517 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 RALAP11233 206 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 PMLP29590 882 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 BRCC3P46736 316 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 RPS9P46781 194 aaKnown RBP20.59■□□□□ 0.89
ACTN4-208ENST00000497637 CARSP49589 748 aaKnown RBP20.59■□□□□ 0.89
ACTN4-208ENST00000497637 PPP2R5DQ14738 602 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 TXNRD3NBQ6F5E7 133 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 TRNP1Q6NT89 227 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 EMBQ6PCB8 327 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 SPOCD1Q6ZMY3 1216 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 SLC26A9Q7LBE3 791 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 CCDC50Q8IVM0 306 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 MYCBPAPQ8TBZ2 947 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 RNF25Q96BH1 459 aaPredicted RBP20.59■□□□□ 0.89
ACTN4-208ENST00000497637 ZNF707Q96C28 371 aaPredicted RBP20.59■□□□□ 0.89
ACTN4-208ENST00000497637 ACBD6Q9BR61 282 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 HERPUD2Q9BSE4 406 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 UBXN6Q9BZV1 441 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 RAB17Q9H0T7 212 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 PRMT8Q9NR22 394 aaPredicted RBP20.59■□□□□ 0.89
ACTN4-208ENST00000497637 ZDHHC7Q9NXF8 308 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 OGFRQ9NZT2 677 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 PCDHB8Q9UN66 801 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 EFR3BQ9Y2G0 817 aa20.59■□□□□ 0.89
ACTN4-208ENST00000497637 TIMM13Q9Y5L4 95 aaPredicted RBP20.59■□□□□ 0.89
ACTN4-208ENST00000497637 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.59■□□□□ 0.89
ACTN4-208ENST00000497637 ZSCAN5CA6NGD5 496 aaPredicted RBP20.58■□□□□ 0.89
ACTN4-208ENST00000497637 MIPP30301 263 aa20.58■□□□□ 0.89
ACTN4-208ENST00000497637 DRG2P55039 364 aaKnown RBP20.58■□□□□ 0.89
ACTN4-208ENST00000497637 TTC27Q6P3X3 843 aa20.58■□□□□ 0.89
ACTN4-208ENST00000497637 MFSD7Q6UXD7 560 aa20.58■□□□□ 0.89
ACTN4-208ENST00000497637 MTSS1LQ765P7 747 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms