RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 USP36Q9P275 1121 aaKnown RBP17.67■□□□□ 0.42
TRAPPC3-207ENST00000497251 ATP6V1DQ9Y5K8 247 aa17.67■□□□□ 0.42
TRAPPC3-207ENST00000497251 ATXN2Q99700 1313 aaKnown RBP17.67■□□□□ 0.42
TRAPPC3-207ENST00000497251 A0A1B0GTW7 788 aa17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 IGLV3-19P01714 112 aa17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 ZNF883P0CG24 379 aa17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 C7P10643 843 aa17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 CD59P13987 128 aa17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 DPYDQ12882 1025 aa17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 PM20D1Q6GTS8 502 aa17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 IL27RAQ6UWB1 636 aa17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 RSRC2Q7L4I2 434 aaKnown RBP17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 ELMO3Q96BJ8 720 aa17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 PLD4Q96BZ4 506 aa17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 TMEM176AQ96HP8 235 aa17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 NUP58Q9BVL2 599 aa17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 GTPBP4Q9BZE4 634 aaKnown RBP17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 SCAND2PQ9GZW5 306 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 ELOVL2Q9NXB9 296 aa17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 WSB2Q9NYS7 404 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 MARCH2Q9P0N8 246 aa17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 PCDHB9Q9Y5E1 797 aa17.66■□□□□ 0.42
TRAPPC3-207ENST00000497251 ZZEF1O43149 2961 aa17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 ACACAQ13085 2346 aa17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 A0A1W2PQ27 194 aa17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 A0A1W2PQ64 194 aa17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 GJB3O75712 270 aa17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 KLKB1P03952 638 aa17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 CD58P19256 250 aa17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 BECN1Q14457 450 aa17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 FUT11Q495W5 492 aa17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 KIAA1324Q6UXG2 1013 aaKnown RBP17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 FAM217AQ8IXS0 508 aa17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 ZNF557Q8N988 423 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 PRCCQ92733 491 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 JAKMIP2Q96AA8 810 aa17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 PIWIL1Q96J94 861 aaKnown RBP17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 FBRSQ9HAH7 460 aa17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 CISHQ9NSE2 258 aa17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 RAB20Q9NX57 234 aa17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 KIAA1257Q9ULG3 409 aa17.65■□□□□ 0.42
TRAPPC3-207ENST00000497251 PCDH15Q96QU1 1955 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 MDM4O15151 490 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 CETN3O15182 167 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 HYAL3O43820 417 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 LATS1O95835 1130 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 TRIM49P0CI25 452 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 TRIM49CP0CI26 452 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 CORO1AP31146 461 aaKnown RBP17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 HARS2P49590 506 aaKnown RBP17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 MXI1P50539 228 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 YWHAGP61981 247 aaKnown RBP eCLIP17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 YWHAEP62258 255 aaKnown RBP17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 EFEMP1Q12805 493 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 TRIP6Q15654 476 aaKnown RBP17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 ZCWPW2Q504Y3 356 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 MPPE1Q53F39 396 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 GLRX5Q86SX6 157 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 PIGZQ86VD9 579 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 TMPRSS6Q8IU80 811 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 DEFB119Q8N690 84 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 ZCCHC14Q8WYQ9 949 aaKnown RBP17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 SIPA1Q96FS4 1042 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 TOE1Q96GM8 510 aaKnown RBP17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 PLK2Q9NYY3 685 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 RASAL2Q9UJF2 1139 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 NUDT5Q9UKK9 219 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 AGO1Q9UL18 857 aaKnown RBP17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 HBS1LQ9Y450 684 aaKnown RBP17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 RAD54BQ9Y620 910 aa17.64■□□□□ 0.41
TRAPPC3-207ENST00000497251 KNTC1P50748 2209 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 SPAARA0A1B0GVQ0 90 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 METTL12A8MUP2 240 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 MEI4A8MW99 385 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 ZBED1O96006 694 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 EPB41P11171 864 aaKnown RBP17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 ACADMP11310 421 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 SPINK2P20155 84 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 RAD23BP54727 409 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 ARID5AQ03989 594 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 TRIP4Q15650 581 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 KRBA2Q6ZNG9 492 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 RAB44Q7Z6P3 723 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 SCML4Q8N228 414 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 SLC4A11Q8NBS3 891 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 WFIKKN2Q8TEU8 576 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 ADAMTS14Q8WXS8 1223 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 BHMTQ93088 406 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 MKRN2Q9H000 416 aaKnown RBP17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 STOML2Q9UJZ1 356 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 APOBEC2Q9Y235 224 aaKnown RBP17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 ZDHHC9Q9Y397 364 aa17.63■□□□□ 0.41
TRAPPC3-207ENST00000497251 SRRM3A6NNA2 597 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 WASH3PC4AMC7 463 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 XPO1O14980 1071 aaKnown RBP17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 CER1O95813 267 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 NCAM1P13591 858 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 IL12RB1P42701 662 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 TPMTP51580 245 aa17.62■□□□□ 0.41
TRAPPC3-207ENST00000497251 NDUFA8P51970 172 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms