RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 FAM90A14PP0C7W9 464 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 CREB1P16220 341 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 CD53P19397 219 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 WT1P19544 449 aaPredicted RBP4.59□□□□□ -1.67
SMC4-225ENST00000497203 DRD4P21917 467 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 MMP8P22894 467 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 GKP32189 559 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 PNLIPRP1P54315 467 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 PDE1AP54750 535 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 ACTR2P61160 394 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 RPS6KA2Q15349 733 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 BTBD16Q32M84 506 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 TBC1D25Q3MII6 688 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 TMEM196Q5HYL7 178 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 TTC22Q5TAA0 569 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 CCDC144NLQ6NUI1 221 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 DPY19L2P1Q6NXN4 242 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 ZNF551Q7Z340 670 aaPredicted RBP4.59□□□□□ -1.67
SMC4-225ENST00000497203 KRT27Q7Z3Y8 459 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 WDR53Q7Z5U6 358 aaPredicted RBP4.59□□□□□ -1.67
SMC4-225ENST00000497203 AMIGO2Q86SJ2 522 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 C2CD5Q86YS7 1000 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 P3H2Q8IVL5 708 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 LRRC71Q8N4P6 559 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 METTL25Q8N6Q8 603 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 SIRT6Q8N6T7 355 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 TEX19Q8NA77 164 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 OR1N1Q8NGS0 311 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 SARAFQ96BY9 339 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 TMLHEQ9NVH6 421 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 PTGFRNQ9P2B2 879 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 PDP2Q9P2J9 529 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 GJD2Q9UKL4 321 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 GABRQQ9UN88 632 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 CNTN6Q9UQ52 1028 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 UBE2J1Q9Y385 318 aaPredicted RBP4.59□□□□□ -1.67
SMC4-225ENST00000497203 TNFRSF18Q9Y5U5 241 aa4.59□□□□□ -1.67
SMC4-225ENST00000497203 GXYLT2A0PJZ3 443 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 GCOM1H8Y6P7 765 aaPredicted RBP4.58□□□□□ -1.68
SMC4-225ENST00000497203 TMPRSS11DO60235 418 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 PPP6R2O75170 966 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 RPP40O75818 363 aaKnown RBP4.58□□□□□ -1.68
SMC4-225ENST00000497203 TJP3O95049 919 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 TK1P04183 234 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 GPD1P21695 349 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 DRD1P21728 446 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 SERPINA4P29622 427 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 PBX1P40424 430 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 CCT8P50990 548 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 SF3A3Q12874 501 aaKnown RBP eCLIP4.58□□□□□ -1.686e-7■■■■■ 34
SMC4-225ENST00000497203 SEMA3BQ13214 749 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 CBFBQ13951 182 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 KCNJ12Q14500 433 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 TBRG1Q3YBR2 411 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 AASDHQ4L235 1098 aaPredicted RBP4.58□□□□□ -1.68
SMC4-225ENST00000497203 ZNF569Q5MCW4 686 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 MSANTD2Q6P1R3 559 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 PTCHD4Q6ZW05 846 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 PARS2Q7L3T8 475 aaKnown RBP4.58□□□□□ -1.68
SMC4-225ENST00000497203 SUGP1Q8IWZ8 645 aaKnown RBP4.58□□□□□ -1.68
SMC4-225ENST00000497203 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.58□□□□□ -1.68
SMC4-225ENST00000497203 AFG1LQ8WV93 481 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 HMGB4Q8WW32 186 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 TWSG1Q9GZX9 223 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 MAF1Q9H063 256 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 VPS16Q9H269 839 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 SNX15Q9NRS6 342 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 RASSF1Q9NS23 344 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 FBXO28Q9NVF7 368 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 FEM1BQ9UK73 627 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 DAPP1Q9UN19 280 aa4.58□□□□□ -1.68
SMC4-225ENST00000497203 RRN3P2A6NIE6 340 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 HMGB1P1B2RPK0 211 aaPredicted RBP4.57□□□□□ -1.68
SMC4-225ENST00000497203 CES2O00748 559 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 CTIFO43310 598 aaKnown RBP4.57□□□□□ -1.68
SMC4-225ENST00000497203 CER1O95813 267 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 MYCLP12524 364 aaPredicted RBP4.57□□□□□ -1.68
SMC4-225ENST00000497203 ZNF37AP17032 561 aaPredicted RBP4.57□□□□□ -1.68
SMC4-225ENST00000497203 NDUFB7P17568 137 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 ADRA1DP25100 572 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 DDIT3P35638 169 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 PRKAA2P54646 552 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 PROK1P58294 105 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 TXNL4AP83876 142 aaKnown RBP4.57□□□□□ -1.68
SMC4-225ENST00000497203 BFSP2Q13515 415 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 CUL4BQ13620 913 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 RALBP1Q15311 655 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 FAM153CQ494X1 144 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 TMEM63BQ5T3F8 832 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 JAKMIP3Q5VZ66 844 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 FAM90A2PQ658T7 463 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 ANKRD16Q6P6B7 361 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 LVRNQ6Q4G3 990 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 PIK3AP1Q6ZUJ8 805 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 Q6ZWC4 215 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 LRRTM4Q86VH4 590 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 PNPLA1Q8N8W4 532 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 IL17REQ8NFR9 667 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 SLC22A17Q8WUG5 538 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 GOLGA1Q92805 767 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms