RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 MEFVO15553 781 aaPredicted RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 PEX1O43933 1283 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 TSPAN3O60637 253 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 CLN5O75503 358 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 FSBPO95073 299 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 NPTXRO95502 500 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 TSPAN15O95858 294 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 GLAP06280 429 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 CLTAP09496 248 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 CLTBP09497 229 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 CYP2C9P11712 490 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ATF6P18850 670 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 KELP23276 732 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 MAPK3P27361 379 aaPredicted RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 HMOX2P30519 316 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 GUCY1A2P33402 732 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 IARSP41252 1262 aaKnown RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 DIO1P49895 249 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 GDI2P50395 445 aaKnown RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 USP14P54578 494 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 CYP4F2P78329 520 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 IDI1Q13907 227 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ZNF460Q14592 562 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 RFTN1Q14699 578 aaPredicted RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 CDONQ4KMG0 1287 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 XKR9Q5GH70 373 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 IL23RQ5VWK5 629 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC30A6Q6NXT4 461 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ABHD17CQ6PCB6 329 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 HHIPL2Q6UWX4 724 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 KRT28Q7Z3Y7 464 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 FAM129CQ86XR2 697 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 KRT73Q86Y46 540 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 C1QL4Q86Z23 238 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 LRRC34Q8IZ02 419 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ZBTB38Q8NAP3 1195 aaPredicted RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 GRK7Q8WTQ7 553 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 MZB1Q8WU39 189 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 STARD8Q92502 1023 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 DIO2Q92813 273 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 EGLN2Q96KS0 407 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 SLF1Q9BQI6 1058 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 HGH1Q9BTY7 390 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 GCOM2Q9BZD3 368 aaPredicted RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 KRT23Q9C075 422 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 STN1Q9H668 368 aaKnown RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 FANCEQ9HB96 536 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ARFGAP3Q9NP61 516 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 RPRD1BQ9NQG5 326 aaKnown RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 PIH1D3Q9NQM4 214 aaKnown RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ITM2CQ9NQX7 267 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 PAQR5Q9NXK6 330 aaPredicted RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 CLDND1Q9NY35 253 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 GPRC5BQ9NZH0 403 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 HACD3Q9P035 362 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 NDUFA13Q9P0J0 144 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 SENP1Q9P0U3 644 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 FETUBQ9UGM5 382 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 SRP68Q9UHB9 627 aaKnown RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ASIC3Q9UHC3 531 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 MOSPD1Q9UJG1 213 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ANKRD6Q9Y2G4 727 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 PCDHGA2Q9Y5H1 932 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 IRAK3Q9Y616 596 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ABCC11Q96J66 1382 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 CCDC144AA2RUR9 1427 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 FHAD1B1AJZ9 1412 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ERBINQ96RT1 1412 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 WDR97A6NE52 1622 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 CYP3A7-CYP3A51PA0A087WV96 503 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TCRBV5S4A2TA0A5A2 114 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ARHGEF37A1IGU5 675 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CTAGE15A4D2H0 777 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TISP43B9A030 160 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 B9A039 149 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 FRS3O43559 492 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TRIM13O60858 407 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ATP5HO75947 161 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 STARD3NLO95772 234 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CHRNA1P02708 482 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 POLBP06746 335 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 WEE2P0C1S8 567 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 LINGO3P0C6S8 592 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CTAGE8P0CG41 777 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PTPN2P17706 415 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 M6PRP20645 277 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ABCB4P21439 1286 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 FGFR4P22455 802 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CYP3A7P24462 503 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 HOXA6P31267 233 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 RAP1GAPP47736 663 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 OR1G1P47890 313 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ID4P47928 161 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PCP4P48539 62 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ACADVLP49748 655 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 HNMTP50135 292 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 MLLT6P55198 1093 aaPredicted RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ERVFRD-1P60508 538 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PPARDQ03181 441 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 IFFO1Q0D2I5 559 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms