RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 INHBEP58166 350 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 PITX1P78337 314 aaPredicted RBP13.5□□□□□ -0.25
GARNL3-220ENST00000496711 SEMA5AQ13591 1074 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 SEPT7Q16181 437 aaKnown RBP13.5□□□□□ -0.25
GARNL3-220ENST00000496711 RNF43Q68DV7 783 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 ZNF534Q76KX8 674 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 FAM35AQ86V20 835 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 BANPQ8N9N5 519 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 RNF139Q8WU17 664 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 HTR3CQ8WXA8 447 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 WNT8BQ93098 351 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 UPF3AQ9H1J1 476 aaKnown RBP13.5□□□□□ -0.25
GARNL3-220ENST00000496711 SLC40A1Q9NP59 571 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 HAUS2Q9NVX0 235 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 KLHL14Q9P2G3 628 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 PHTF1Q9UMS5 762 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 MFHAS1Q9Y4C4 1052 aa13.5□□□□□ -0.25
GARNL3-220ENST00000496711 M0QYT0 321 aa13.49□□□□□ -0.25
GARNL3-220ENST00000496711 UBOX5O94941 541 aa13.49□□□□□ -0.25
GARNL3-220ENST00000496711 MT-ND3P03897 115 aa13.49□□□□□ -0.25
GARNL3-220ENST00000496711 ALADP13716 330 aa13.49□□□□□ -0.25
GARNL3-220ENST00000496711 VAV1P15498 845 aa13.49□□□□□ -0.25
GARNL3-220ENST00000496711 IGFBP6P24592 240 aaPredicted RBP13.49□□□□□ -0.25
GARNL3-220ENST00000496711 NDUFV1P49821 464 aa13.49□□□□□ -0.25
GARNL3-220ENST00000496711 CLCNKBP51801 687 aa13.49□□□□□ -0.25
GARNL3-220ENST00000496711 DEUP1Q05D60 604 aa13.49□□□□□ -0.25
GARNL3-220ENST00000496711 FAM133BQ5BKY9 247 aaKnown RBP13.49□□□□□ -0.25
GARNL3-220ENST00000496711 DSTYKQ6XUX3 929 aa13.49□□□□□ -0.25
GARNL3-220ENST00000496711 SAPCD2Q86UD0 394 aa13.49□□□□□ -0.25
GARNL3-220ENST00000496711 SERINC5Q86VE9 423 aa13.49□□□□□ -0.25
GARNL3-220ENST00000496711 CCDC33Q8N5R6 958 aa13.49□□□□□ -0.25
GARNL3-220ENST00000496711 SPOCK2Q92563 424 aa13.49□□□□□ -0.25
GARNL3-220ENST00000496711 LPPQ93052 612 aa13.49□□□□□ -0.25
GARNL3-220ENST00000496711 XAB2Q9HCS7 855 aaKnown RBP13.49□□□□□ -0.25
GARNL3-220ENST00000496711 GIT1Q9Y2X7 761 aa13.49□□□□□ -0.25
GARNL3-220ENST00000496711 COL4A4P53420 1690 aaPredicted RBP13.49□□□□□ -0.25
GARNL3-220ENST00000496711 SYNJ2BP-COX16A0A087WUM0 186 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 A0A0A0MRY4 1105 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 ARL5CA6NH57 179 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 GOLGA8RI6L899 631 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 TRDMT1O14717 391 aaKnown RBP13.48□□□□□ -0.25
GARNL3-220ENST00000496711 EDF1O60869 148 aaKnown RBP13.48□□□□□ -0.25
GARNL3-220ENST00000496711 AP1G2O75843 785 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 RASSF9O75901 435 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 PGK1P00558 417 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 CHRNA1P02708 482 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 C1QAP02745 245 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 RPLP2P05387 115 aaKnown RBP13.48□□□□□ -0.25
GARNL3-220ENST00000496711 PRKCHP24723 683 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 ADRA1DP25100 572 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 FDFT1P37268 417 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 MGAT3Q09327 533 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 MFSD14CQ5VZR4 134 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 SLC26A11Q86WA9 606 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 C3orf58Q8NDZ4 430 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 TCP10LQ8TDR4 215 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 APOPT1Q96IL0 206 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 RMDN2Q96LZ7 410 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 SPATA13Q96N96 652 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 KLF6Q99612 283 aaPredicted RBP13.48□□□□□ -0.25
GARNL3-220ENST00000496711 ULBP1Q9BZM6 244 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 SPC25Q9HBM1 224 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 RXFP1Q9HBX9 757 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 NMRK2Q9NPI5 230 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 COX16Q9P0S2 106 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 ZNF180Q9UJW8 692 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 CDH9Q9ULB4 789 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 PTCH2Q9Y6C5 1203 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 NLRC5Q86WI3 1866 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 GPR182O15218 404 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 LPXNO60711 386 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 STK10O94804 968 aaKnown RBP13.48□□□□□ -0.25
GARNL3-220ENST00000496711 APOEP02649 317 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 SCNN1GP51170 649 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 AFF1P51825 1210 aaKnown RBP13.48□□□□□ -0.25
GARNL3-220ENST00000496711 AIF1P55008 147 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 DAOAP59103 153 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 FAAP100Q0VG06 881 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 SREBF2Q12772 1141 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 NME3Q13232 169 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 PRKD1Q15139 912 aaPredicted RBP13.48□□□□□ -0.25
GARNL3-220ENST00000496711 GALNTL6Q49A17 601 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 ANKRD20A2Q5SQ80 823 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 ANKRD20A1Q5TYW2 823 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 TTC39BQ5VTQ0 682 aaPredicted RBP13.48□□□□□ -0.25
GARNL3-220ENST00000496711 ANKRD20A3Q5VUR7 823 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 SYPL2Q5VXT5 272 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 UNC5AQ6ZN44 842 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 AGMOQ6ZNB7 445 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 DENND5BQ6ZUT9 1274 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 HFE2Q6ZVN8 426 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 PRPF39Q86UA1 669 aaKnown RBP13.48□□□□□ -0.25
GARNL3-220ENST00000496711 LRRC6Q86X45 466 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 CTAGE3PQ8IX95 158 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 PPM1NQ8N819 430 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 CCDC63Q8NA47 563 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 TRIB2Q92519 343 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 PCED1BQ96HM7 432 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 SLC9A7Q96T83 725 aa13.48□□□□□ -0.25
GARNL3-220ENST00000496711 SMOQ99835 787 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms