RNA–Protein interactions for RNA: ENST00000496239.5

NECAP2-207, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 2

Gene NECAP2, Length 4,619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-207ENST00000496239 NKX2-4Q9H2Z4 354 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 STN1Q9H668 368 aaKnown RBP11.3□□□□□ -0.6
NECAP2-207ENST00000496239 ERVK-5Q9HDB9 667 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 ZC3H7BQ9UGR2 993 aaKnown RBP11.3□□□□□ -0.6
NECAP2-207ENST00000496239 TELO2Q9Y4R8 837 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 ASB3Q9Y575 518 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 SCN7AQ01118 1682 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 SIGLEC16A6NMB1 481 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 KCNK1O00180 336 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 CHRNA1P02708 482 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 MARSP56192 900 aaKnown RBP11.3□□□□□ -0.6
NECAP2-207ENST00000496239 ACAP1Q15027 740 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 KLHL38Q2WGJ6 581 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 FOXR2Q6PJQ5 311 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 C4orf22Q6V702 233 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 TRIM67Q6ZTA4 783 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 RASSF3Q86WH2 238 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 EXD1Q8NHP7 514 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 ZNF669Q96BR6 464 aaPredicted RBP11.3□□□□□ -0.6
NECAP2-207ENST00000496239 FUBP3Q96I24 572 aaKnown RBP eCLIP11.3□□□□□ -0.6
NECAP2-207ENST00000496239 TM6SF2Q9BZW4 377 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 LACRTQ9GZZ8 138 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 RABEP2Q9H5N1 569 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 UBP1Q9NZI7 540 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 SEPT3Q9UH03 358 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 XPO7Q9UIA9 1087 aaKnown RBP11.3□□□□□ -0.6
NECAP2-207ENST00000496239 O00370 1275 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 CHEK2O96017 543 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 BCL2L1Q07817 233 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 UGP2Q16851 508 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 FASTKD1Q53R41 847 aaKnown RBP11.3□□□□□ -0.6
NECAP2-207ENST00000496239 DNAJB7Q7Z6W7 309 aaPredicted RBP11.3□□□□□ -0.6
NECAP2-207ENST00000496239 VSIG1Q86XK7 387 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 GPR88Q9GZN0 384 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 RGS18Q9NS28 235 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 FBXO10Q9UK96 956 aa11.3□□□□□ -0.6
NECAP2-207ENST00000496239 A0A1W2PRU2 124 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 IL1BP01584 269 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 PIGRP01833 764 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 APODP05090 189 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 LMO2P25791 158 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 ZNF135P52742 658 aaPredicted RBP11.29□□□□□ -0.6
NECAP2-207ENST00000496239 UBXN2BQ14CS0 331 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 MEI1Q5TIA1 1274 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 TBC1D1Q86TI0 1168 aaPredicted RBP11.29□□□□□ -0.6
NECAP2-207ENST00000496239 C2orf15Q8WU43 125 aaKnown RBP11.29□□□□□ -0.6
NECAP2-207ENST00000496239 IGSF21Q96ID5 467 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 MIR1-1HGQ9H1L0 117 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 ARHGEF38Q9NXL2 777 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 ZNF510Q9Y2H8 683 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 CPQQ9Y646 472 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 NDUFAB1O14561 156 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 ZNF623O75123 536 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 FOSL2P15408 326 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 CHRM3P20309 590 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 KCNA5P22460 613 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 MATKP42679 507 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 ATP1A2P50993 1020 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 KCNMA1Q12791 1236 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 SYDE1Q6ZW31 735 aaPredicted RBP11.29□□□□□ -0.6
NECAP2-207ENST00000496239 OTOP3Q7RTS5 596 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 ZSWIM2Q8NEG5 633 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 LPCAT1Q8NF37 534 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 SPATA20Q8TB22 786 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 GRIN3AQ8TCU5 1115 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 CALML6Q8TD86 181 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 OSGEPL1Q9H4B0 414 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 RRAGDQ9NQL2 400 aaPredicted RBP11.29□□□□□ -0.6
NECAP2-207ENST00000496239 YIPF1Q9Y548 306 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 COPEO14579 308 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 TTI1O43156 1089 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 CSE1LP55060 971 aaKnown RBP11.29□□□□□ -0.6
NECAP2-207ENST00000496239 CDCA2Q69YH5 1023 aaPredicted RBP11.29□□□□□ -0.6
NECAP2-207ENST00000496239 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.29□□□□□ -0.62e-6■■■■□ 19.7
NECAP2-207ENST00000496239 TMCO2Q7Z6W1 182 aaPredicted RBP11.29□□□□□ -0.6
NECAP2-207ENST00000496239 ZNF280BQ86YH2 543 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 ATG4AQ8WYN0 398 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 KREMEN1Q96MU8 473 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 TPX2Q9ULW0 747 aaKnown RBP11.29□□□□□ -0.6
NECAP2-207ENST00000496239 FSHRP23945 695 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 CST5P28325 142 aaPredicted RBP11.29□□□□□ -0.6
NECAP2-207ENST00000496239 FDFT1P37268 417 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 THOP1P52888 689 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 POLR2LP62875 67 aaKnown RBP11.29□□□□□ -0.6
NECAP2-207ENST00000496239 CENPCQ03188 943 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 PDLIM2Q96JY6 352 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 CEP41Q9BYV8 373 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 ZYG11BQ9C0D3 744 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 MAN1C1Q9NR34 630 aa11.29□□□□□ -0.6
NECAP2-207ENST00000496239 C20orf96Q9NUD7 363 aaPredicted RBP11.29□□□□□ -0.6
NECAP2-207ENST00000496239 FRMD3A2A2Y4 597 aa11.28□□□□□ -0.6
NECAP2-207ENST00000496239 C1QTNF3-AMACRE9PGA6 284 aa11.28□□□□□ -0.6
NECAP2-207ENST00000496239 SOD2P04179 222 aa11.28□□□□□ -0.6
NECAP2-207ENST00000496239 KCNE1P15382 129 aa11.28□□□□□ -0.6
NECAP2-207ENST00000496239 RGS4P49798 205 aa11.28□□□□□ -0.6
NECAP2-207ENST00000496239 NOMO3P69849 1222 aa11.28□□□□□ -0.6
NECAP2-207ENST00000496239 IL9RQ01113 521 aa11.28□□□□□ -0.6
NECAP2-207ENST00000496239 PDAP1Q13442 181 aaKnown RBP11.28□□□□□ -0.6
NECAP2-207ENST00000496239 MIIPQ5JXC2 388 aa11.28□□□□□ -0.6
NECAP2-207ENST00000496239 EPM2AIP1Q7L775 607 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms