RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 SNNO75324 88 aaPredicted RBP13.46□□□□□ -0.26
PTPN7-217ENST00000495688 CNMDO75829 334 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 MCF2P10911 925 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 KCNA4P22459 653 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 L1CAMP32004 1257 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 MAGEA6P43360 314 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 PHKA2P46019 1235 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 MRPS35P82673 323 aaKnown RBP13.46□□□□□ -0.26
PTPN7-217ENST00000495688 SLC6A3Q01959 620 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 GRIK3Q13003 919 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 CASC4Q6P4E1 433 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 TMPRSS6Q8IU80 811 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 CRLF3Q8IUI8 442 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 C7orf31Q8N865 590 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 KIF12Q96FN5 646 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 ZNF778Q96MU6 729 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 PANX3Q96QZ0 392 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 PLA2G4CQ9UP65 541 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 CITO14578 2027 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 F7P08709 466 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-217ENST00000495688 CRHR1P34998 444 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 RPL10AP62906 217 aaKnown RBP13.45□□□□□ -0.26
PTPN7-217ENST00000495688 CMPK2Q5EBM0 449 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 BSPRYQ5W0U4 402 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 RIPOR1Q6ZS17 1223 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 PHC3Q8NDX5 983 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 OTUD5Q96G74 571 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 LGMNQ99538 433 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 CCDC106Q9BWC9 280 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 MAF1Q9H063 256 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 WWP1Q9H0M0 922 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 DPEP3Q9H4B8 488 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 MTMR10Q9NXD2 777 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 HESX1Q9UBX0 185 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 SLC7A8Q9UHI5 535 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 PSAT1Q9Y617 370 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 EME2A4GXA9 379 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-217ENST00000495688 ALDOAP04075 364 aaKnown RBP13.45□□□□□ -0.26
PTPN7-217ENST00000495688 RBP5P82980 135 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 STX3Q13277 289 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 PKDCCQ504Y2 493 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 FAM91A1Q658Y4 838 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 SCUBE1Q8IWY4 988 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 EXOC8Q8IYI6 725 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 ULK2Q8IYT8 1036 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 CCDC185Q8N715 623 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 MCUQ8NE86 351 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 SLC35F5Q8WV83 523 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 TEKT4Q8WW24 435 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 ZNF670Q9BS34 389 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 FRMD8Q9BZ67 464 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-217ENST00000495688 EMCNQ9ULC0 261 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 LRCH1Q9Y2L9 728 aa13.45□□□□□ -0.26
PTPN7-217ENST00000495688 MDM4O15151 490 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 USP1O94782 785 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 RAP1GDS1P52306 607 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 FASTKD1Q53R41 847 aaKnown RBP13.44□□□□□ -0.26
PTPN7-217ENST00000495688 RNF220Q5VTB9 566 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 POU5F2Q8N7G0 328 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 ZMAT2Q96NC0 199 aaKnown RBP13.44□□□□□ -0.26
PTPN7-217ENST00000495688 SHCBP1LQ9BZQ2 653 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 PIDD1Q9HB75 910 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 XAB2Q9HCS7 855 aaKnown RBP13.44□□□□□ -0.26
PTPN7-217ENST00000495688 TMPRSS4Q9NRS4 437 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 DTLQ9NZJ0 730 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 TAGLN3Q9UI15 199 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 PCDHA11Q9Y5I1 949 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 DPYSL4O14531 572 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 GCATO75600 419 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 C6orf222P0C671 652 aaPredicted RBP13.44□□□□□ -0.26
PTPN7-217ENST00000495688 ZNF286BP0CG31 522 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 VAV1P15498 845 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 GOT1P17174 413 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 SP100P23497 879 aaPredicted RBP13.44□□□□□ -0.26
PTPN7-217ENST00000495688 SESN2P58004 480 aaPredicted RBP13.44□□□□□ -0.26
PTPN7-217ENST00000495688 MXRA7P84157 204 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 AP1B1Q10567 949 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 CBLBQ13191 982 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 SOWAHAQ2M3V2 549 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 GLRA4Q5JXX5 417 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 CES3Q6UWW8 571 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 TMEM110Q86TL2 294 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 TRIM42Q8IWZ5 723 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 CFAP61Q8NHU2 1237 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 LRRC39Q96DD0 335 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 CLMNQ96JQ2 1002 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 KCTD15Q96SI1 283 aaPredicted RBP13.44□□□□□ -0.26
PTPN7-217ENST00000495688 TTC1Q99614 292 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 SLC4A5Q9BY07 1137 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 PPP1R12CQ9BZL4 782 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 MOCS1Q9NZB8 636 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 ITGA11Q9UKX5 1188 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 AP4E1Q9UPM8 1137 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 GINS2Q9Y248 185 aa13.44□□□□□ -0.26
PTPN7-217ENST00000495688 SPECC1L-ADORA2AF8WAN1 911 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 TPP1O14773 563 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 MAGEC1O60732 1142 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 TM7SF2O76062 418 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 SORBS2O94875 1100 aaKnown RBP13.43□□□□□ -0.26
PTPN7-217ENST00000495688 LCP1P13796 627 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms