RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 CAMK1Q14012 370 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 DPYSL2Q16555 572 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 AAK1Q2M2I8 961 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 TUBB8Q3ZCM7 444 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 CTXN3Q4LDR2 81 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 EFHC2Q5JST6 749 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 KIAA0319Q5VV43 1072 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 PM20D1Q6GTS8 502 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 TMEM184AQ6ZMB5 413 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 DDX42Q86XP3 938 aaKnown RBP eCLIP10.65□□□□□ -0.7
HDAC3-214ENST00000495485 ALLCQ8N6M5 410 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 UBLCP1Q8WVY7 318 aaPredicted RBP10.65□□□□□ -0.7
HDAC3-214ENST00000495485 MYLIPQ8WY64 445 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 KHSRPQ92945 711 aaKnown RBP eCLIP10.65□□□□□ -0.7
HDAC3-214ENST00000495485 NT5C3BQ969T7 300 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 PGAP3Q96FM1 320 aaPredicted RBP10.65□□□□□ -0.7
HDAC3-214ENST00000495485 CEP295NLQ96MC4 621 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 FAM161BQ96MY7 647 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 LPIN3Q9BQK8 851 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 SNRNP25Q9BV90 132 aaKnown RBP10.65□□□□□ -0.7
HDAC3-214ENST00000495485 ULBP1Q9BZM6 244 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 ZCWPW1Q9H0M4 648 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 PCDH9Q9HC56 1237 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 ABCC13Q9NSE7 274 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 CACNG4Q9UBN1 327 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 AP4E1Q9UPM8 1137 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 CUL9Q8IWT3 2517 aa10.65□□□□□ -0.7
HDAC3-214ENST00000495485 C2orf71A6NGG8 1288 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 NT5C1B-RDH14C9J2C7 533 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 H7C0C1 242 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 I3L4J1 428 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 B4GALT3O60512 393 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 LILRB3O75022 631 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 PPFIA2O75334 1257 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 RTN3O95197 1032 aaPredicted RBP10.64□□□□□ -0.71
HDAC3-214ENST00000495485 CXCL14O95715 111 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 RARGP13631 454 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 TCF4P15884 667 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 HOXB8P17481 243 aaPredicted RBP10.64□□□□□ -0.71
HDAC3-214ENST00000495485 OAS2P29728 719 aaKnown RBP10.64□□□□□ -0.71
HDAC3-214ENST00000495485 ATP5OP48047 213 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 NDUFV1P49821 464 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 CDR1P51861 262 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 PMS2P54278 862 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 HDAC4P56524 1084 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 CBX1P83916 185 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 OTUD4Q01804 1114 aaKnown RBP10.64□□□□□ -0.71
HDAC3-214ENST00000495485 ROR1Q01973 937 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 MTA1Q13330 715 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 DPYSL3Q14195 570 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 ADGRE1Q14246 886 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 LLGL1Q15334 1064 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 DUSP6Q16828 381 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 PUS10Q3MIT2 529 aaKnown RBP10.64□□□□□ -0.71
HDAC3-214ENST00000495485 SLC39A12Q504Y0 691 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 ANKRD20A8PQ5CZ79 823 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 ACBD5Q5T8D3 534 aaPredicted RBP10.64□□□□□ -0.71
HDAC3-214ENST00000495485 FAM171A1Q5VUB5 890 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 BTBD8Q5XKL5 378 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 DENND2CQ68D51 928 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 TXNRD3NBQ6F5E7 133 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 DARS2Q6PI48 645 aaKnown RBP10.64□□□□□ -0.71
HDAC3-214ENST00000495485 CD300LGQ6UXG3 332 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 PPP1R21Q6ZMI0 780 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 TRMT10CQ7L0Y3 403 aaKnown RBP10.64□□□□□ -0.71
HDAC3-214ENST00000495485 TMC3Q7Z5M5 1100 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 HOOK3Q86VS8 718 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 CDKL3Q8IVW4 592 aaPredicted RBP10.64□□□□□ -0.71
HDAC3-214ENST00000495485 ZDHHC14Q8IZN3 488 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 EFHBQ8N7U6 833 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 ACTL9Q8TC94 416 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 SPPL2BQ8TCT7 592 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 CLEC4CQ8WTT0 213 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 RNF139Q8WU17 664 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 ATG4AQ8WYN0 398 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 CASP10Q92851 521 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 NTAN1Q96AB6 310 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 PABPC5Q96DU9 382 aaKnown RBP10.64□□□□□ -0.71
HDAC3-214ENST00000495485 C8orf48Q96LL4 319 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 GDAP1L1Q96MZ0 367 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 NPY6RQ99463 290 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 CCDC77Q9BR77 488 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 RHOBTB2Q9BYZ6 727 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 GPR62Q9BZJ7 368 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 DHX35Q9H5Z1 703 aaKnown RBP10.64□□□□□ -0.71
HDAC3-214ENST00000495485 TLE6Q9H808 572 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 PCDH18Q9HCL0 1135 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 DZANK1Q9NVP4 752 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 HCSTQ9UBK5 93 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 DNPEPQ9ULA0 475 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 FZD10Q9ULW2 581 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 FAM50BQ9Y247 325 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 R3HDM2Q9Y2K5 976 aaKnown RBP10.64□□□□□ -0.71
HDAC3-214ENST00000495485 RAD54BQ9Y620 910 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 BDP1A6H8Y1 2624 aa10.64□□□□□ -0.71
HDAC3-214ENST00000495485 UNC80Q8N2C7 3258 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 HACD1B0YJ81 288 aa10.63□□□□□ -0.71
HDAC3-214ENST00000495485 DNALI1O14645 258 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-214ENST00000495485 GABBR2O75899 941 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms