RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 TRIP4Q15650 581 aaPredicted RBP11.09□□□□□ -0.63
NELFE-213ENST00000494956 TPD52L1Q16890 204 aaPredicted RBP11.09□□□□□ -0.63
NELFE-213ENST00000494956 EOGTQ5NDL2 527 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 ARMCX6Q7L4S7 300 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 SCUBE3Q8IX30 993 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 PGBD3Q8N328 593 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 DEFB119Q8N690 84 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 MLKLQ8NB16 471 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 ADAM32Q8TC27 787 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 RNF139Q8WU17 664 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 ZNF606Q8WXB4 792 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 SORCS1Q8WY21 1168 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 MYEOVQ96EZ4 313 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 PIWIL1Q96J94 861 aaKnown RBP11.09□□□□□ -0.63
NELFE-213ENST00000494956 ZC3H10Q96K80 434 aaKnown RBP11.09□□□□□ -0.63
NELFE-213ENST00000494956 CDK5RAP1Q96SZ6 601 aaKnown RBP11.09□□□□□ -0.63
NELFE-213ENST00000494956 DLL3Q9NYJ7 618 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 BCCIPQ9P287 314 aaKnown RBP eCLIP11.09□□□□□ -0.63
NELFE-213ENST00000494956 WDR35Q9P2L0 1181 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 MBD1Q9UIS9 605 aaPredicted RBP11.09□□□□□ -0.63
NELFE-213ENST00000494956 FBXO10Q9UK96 956 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 NAALADL1Q9UQQ1 740 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 TNRC6BQ9UPQ9 1833 aaKnown RBP11.09□□□□□ -0.63
NELFE-213ENST00000494956 PLXND1Q9Y4D7 1925 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 A0A1W2PQF6 199 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 THAP12O43422 761 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 NTSR1P30989 418 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 MPLP40238 635 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 MFAP3P55082 362 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 PITX1P78337 314 aaPredicted RBP11.08□□□□□ -0.64
NELFE-213ENST00000494956 CREB5Q02930 508 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 LMNB2Q03252 620 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 PUM1Q14671 1186 aaKnown RBP eCLIP11.08□□□□□ -0.64
NELFE-213ENST00000494956 CSRP2Q16527 193 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 USP39Q53GS9 565 aaKnown RBP11.08□□□□□ -0.64
NELFE-213ENST00000494956 MIIPQ5JXC2 388 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 SYPL2Q5VXT5 272 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 PMS2CLQ68D20 193 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 TMEM215Q68D42 235 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 DPY19L2P1Q6NXN4 242 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 RFWD3Q6PCD5 774 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 GBP6Q6ZN66 633 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 DGLUCYQ7Z3D6 616 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 PASD1Q8IV76 773 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 TMEFF1Q8IYR6 380 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 CHPFQ8IZ52 775 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 SCML4Q8N228 414 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 GPR161Q8N6U8 529 aaKnown RBP11.08□□□□□ -0.64
NELFE-213ENST00000494956 CCDC26Q8TAB7 109 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 OLIG1Q8TAK6 271 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 WFDC5Q8TCV5 224 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 GPT2Q8TD30 523 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 DDI1Q8WTU0 396 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 PLD4Q96BZ4 506 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 DCLK3Q9C098 648 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 CD248Q9HCU0 757 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 POLMQ9NP87 494 aaPredicted RBP11.08□□□□□ -0.64
NELFE-213ENST00000494956 PLCB1Q9NQ66 1216 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 ABCC13Q9NSE7 274 aa11.08□□□□□ -0.64
NELFE-213ENST00000494956 SAMSN1Q9NSI8 373 aaKnown RBP11.08□□□□□ -0.64
NELFE-213ENST00000494956 OLA1Q9NTK5 396 aaKnown RBP11.08□□□□□ -0.64
NELFE-213ENST00000494956 ADAMTS9Q9P2N4 1935 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 PATE3B3GLJ2 98 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 E5RJQ4 531 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 PAPSS1O43252 624 aaPredicted RBP11.07□□□□□ -0.64
NELFE-213ENST00000494956 NCAM1P13591 858 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 NDUFV2P19404 249 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 HOXD9P28356 352 aaPredicted RBP11.07□□□□□ -0.64
NELFE-213ENST00000494956 GNA15P30679 374 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 SLC6A4P31645 630 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 CHKAP35790 457 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 P2RY2P41231 377 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 DHPSP49366 369 aaPredicted RBP11.07□□□□□ -0.64
NELFE-213ENST00000494956 KCNMA1Q12791 1236 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 TAF5Q15542 800 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 EXOC3L4Q17RC7 722 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 MAP7D1Q3KQU3 841 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 AASDHQ4L235 1098 aaPredicted RBP11.07□□□□□ -0.64
NELFE-213ENST00000494956 PLA2G2CQ5R387 149 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 NADSYN1Q6IA69 706 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 MSANTD2Q6P1R3 559 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 FAM217AQ8IXS0 508 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 CPXM2Q8N436 756 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 WDTC1Q8N5D0 677 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 DQX1Q8TE96 717 aaKnown RBP11.07□□□□□ -0.64
NELFE-213ENST00000494956 FAM149B1Q96BN6 582 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 HSFY1Q96LI6 401 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 THAP9Q9H5L6 903 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 CALCOCO1Q9P1Z2 691 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 APEX2Q9UBZ4 518 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 XPO7Q9UIA9 1087 aaKnown RBP11.07□□□□□ -0.64
NELFE-213ENST00000494956 DNAJC12Q9UKB3 198 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 CDV3Q9UKY7 258 aaKnown RBP11.07□□□□□ -0.64
NELFE-213ENST00000494956 ZNF510Q9Y2H8 683 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 STARD13Q9Y3M8 1113 aa11.07□□□□□ -0.64
NELFE-213ENST00000494956 HBS1LQ9Y450 684 aaKnown RBP11.07□□□□□ -0.64
NELFE-213ENST00000494956 ATXN2Q99700 1313 aaKnown RBP11.07□□□□□ -0.64
NELFE-213ENST00000494956 MUC22E2RYF6 1773 aaPredicted RBP11.06□□□□□ -0.64
NELFE-213ENST00000494956 BCLAF3A2AJT9 711 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms