RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 CYP4X1Q8N118 509 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 CRIPAKQ8N1N5 446 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 AGGF1Q8N302 714 aaeCLIP11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 SLC7A14Q8TBB6 771 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 ADAM32Q8TC27 787 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 FTHL17Q9BXU8 183 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 PAK6Q9NQU5 681 aaPredicted RBP11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 TMEM161AQ9NX61 479 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 SAGE1Q9NXZ1 904 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 SF3B1O75533 1304 aaKnown RBP eCLIP11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 SYNJ2BP-COX16A0A087WUM0 186 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 A0A087WUV0 522 aaPredicted RBP11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 FAM72CH0Y354 149 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 TNFRSF10BO14763 440 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 ABCB7O75027 752 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 OAZ2O95190 189 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 IGLV3-25P01717 112 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 COL6A1P12109 1028 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 VAV1P15498 845 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 AIF1P55008 147 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 ARL4CP56559 192 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 PPARDQ03181 441 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 YWHAHQ04917 246 aaPredicted RBP11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 NME3Q13232 169 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 EIF4EBP2Q13542 120 aaPredicted RBP11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 MAPRE1Q15691 268 aaKnown RBP11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 CCDC38Q502W7 563 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 FAM72AQ5TYM5 149 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 FAM72DQ6L9T8 149 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 KCNT2Q6UVM3 1135 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 FAM72BQ86X60 149 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 CDKL3Q8IVW4 592 aaPredicted RBP11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 MDM1Q8TC05 714 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 URGCPQ8TCY9 931 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 ELAC1Q9H777 363 aaKnown RBP11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 PRDM16Q9HAZ2 1276 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 COX16Q9P0S2 106 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 PAK5Q9P286 719 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 XPO7Q9UIA9 1087 aaKnown RBP11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 FBXW11Q9UKB1 542 aa11.01□□□□□ -0.65
PRPF4B-209ENST00000494674 COL4A6Q14031 1691 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 ARHGEF37A1IGU5 675 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 FOXO6A8MYZ6 492 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 H3BRJ5 948 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 ENPP3O14638 875 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 DCLK1O15075 740 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 CHADO15335 359 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 GCATO75600 419 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 OR4Q2P0C623 313 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 NCAM1P13591 858 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 CREB1P16220 341 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 ARL4AP40617 200 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 CXCR3P49682 368 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 GATMP50440 423 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 BASP1P80723 227 aaKnown RBP11□□□□□ -0.65
PRPF4B-209ENST00000494674 TSPY1Q01534 308 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 ARHGEF6Q15052 776 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 PRKD1Q15139 912 aaPredicted RBP11□□□□□ -0.65
PRPF4B-209ENST00000494674 BSPRYQ5W0U4 402 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 BEND5Q7L4P6 421 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 TAC4Q86UU9 113 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 ANKMY2Q8IV38 441 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 IGDCC3Q8IVU1 814 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 THEM5Q8N1Q8 247 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 CCDC33Q8N5R6 958 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 DBF4BQ8NFT6 615 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 SCAMP5Q8TAC9 235 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 CCDC110Q8TBZ0 833 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 ATXN2LQ8WWM7 1075 aaKnown RBP11□□□□□ -0.65
PRPF4B-209ENST00000494674 MAML1Q92585 1016 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 EDEM1Q92611 657 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 SEZ6LQ9BYH1 1024 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 ZCWPW1Q9H0M4 648 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 STMN4Q9H169 189 aaPredicted RBP11□□□□□ -0.65
PRPF4B-209ENST00000494674 EPN3Q9H201 632 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 CNOT10Q9H9A5 744 aaKnown RBP11□□□□□ -0.65
PRPF4B-209ENST00000494674 RRN3Q9NYV6 651 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 KANSL3Q9P2N6 904 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 TRIM17Q9Y577 477 aa11□□□□□ -0.65
PRPF4B-209ENST00000494674 C5orf60A6NFR6 353 aa10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 PITPNM1O00562 1244 aa10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 CAPN9O14815 690 aa10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 CDH16O75309 829 aa10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 IVLP07476 585 aa10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 PGFP49763 221 aa10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 SEC24CP53992 1094 aa10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 HNRNPH2P55795 449 aaKnown RBP10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 RNASELQ05823 741 aaKnown RBP10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 BFSP2Q13515 415 aa10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 PAFAH1B3Q15102 231 aaKnown RBP10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 EFHC2Q5JST6 749 aa10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 ARTNQ5T4W7 220 aa10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 VSTM1Q6UX27 236 aa10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 RFX8Q6ZV50 586 aa10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 TDRPQ86YL5 185 aa10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 DQX1Q8TE96 717 aaKnown RBP10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 ARHGEF2Q92974 986 aaKnown RBP10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 CENPTQ96BT3 561 aa10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 CASD1Q96PB1 797 aa10.99□□□□□ -0.65
PRPF4B-209ENST00000494674 COLEC11Q9BWP8 271 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms