RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 FBXO10Q9UK96 956 aa34.65■■■■□ 3.14
CBX4-203ENST00000494546 NFE2L3Q9Y4A8 694 aa34.65■■■■□ 3.14
CBX4-203ENST00000494546 NCAM1P13591 858 aa34.64■■■■□ 3.14
CBX4-203ENST00000494546 FAM217AQ8IXS0 508 aa34.64■■■■□ 3.14
CBX4-203ENST00000494546 SLC4A5Q9BY07 1137 aa34.64■■■■□ 3.14
CBX4-203ENST00000494546 CYTH4Q9UIA0 394 aa34.64■■■■□ 3.14
CBX4-203ENST00000494546 EML5Q05BV3 1969 aa34.63■■■■□ 3.14
CBX4-203ENST00000494546 TCRBV21S2A2A0A5A6 115 aa34.63■■■■□ 3.13
CBX4-203ENST00000494546 SART1O43290 800 aaKnown RBP34.63■■■■□ 3.13
CBX4-203ENST00000494546 NTSR1P30989 418 aa34.63■■■■□ 3.13
CBX4-203ENST00000494546 PLK5Q496M5 336 aa34.63■■■■□ 3.13
CBX4-203ENST00000494546 TCP11X2Q5H9J9 407 aa34.63■■■■□ 3.13
CBX4-203ENST00000494546 RBM43Q6ZSC3 357 aaKnown RBP34.63■■■■□ 3.13
CBX4-203ENST00000494546 CHPFQ8IZ52 775 aa34.63■■■■□ 3.13
CBX4-203ENST00000494546 ENOX1Q8TC92 643 aaKnown RBP34.63■■■■□ 3.13
CBX4-203ENST00000494546 HMGB4Q8WW32 186 aa34.63■■■■□ 3.13
CBX4-203ENST00000494546 RMDN1Q96DB5 314 aa34.63■■■■□ 3.13
CBX4-203ENST00000494546 ACOX2Q99424 681 aa34.63■■■■□ 3.13
CBX4-203ENST00000494546 E5RJQ4 531 aa34.62■■■■□ 3.13
CBX4-203ENST00000494546 TSPAN3O60637 253 aa34.62■■■■□ 3.13
CBX4-203ENST00000494546 LRP3O75074 770 aa34.62■■■■□ 3.13
CBX4-203ENST00000494546 HOXB2P14652 356 aa34.62■■■■□ 3.13
CBX4-203ENST00000494546 EEF1GP26641 437 aaKnown RBP34.62■■■■□ 3.13
CBX4-203ENST00000494546 GBP1P32455 592 aa34.62■■■■□ 3.13
CBX4-203ENST00000494546 PTK2Q05397 1052 aa34.62■■■■□ 3.13
CBX4-203ENST00000494546 SDE2Q6IQ49 451 aa34.62■■■■□ 3.13
CBX4-203ENST00000494546 PGBD3Q8N328 593 aa34.62■■■■□ 3.13
CBX4-203ENST00000494546 LOXL4Q96JB6 756 aa34.62■■■■□ 3.13
CBX4-203ENST00000494546 ZC3H10Q96K80 434 aaKnown RBP34.62■■■■□ 3.13
CBX4-203ENST00000494546 ARRDC1-AS1Q9H2J1 176 aa34.62■■■■□ 3.13
CBX4-203ENST00000494546 SEMA4GQ9NTN9 838 aa34.62■■■■□ 3.13
CBX4-203ENST00000494546 FOXN3O00409 490 aaPredicted RBP34.61■■■■□ 3.13
CBX4-203ENST00000494546 PAPSS1O43252 624 aaPredicted RBP34.61■■■■□ 3.13
CBX4-203ENST00000494546 FYNP06241 537 aa34.61■■■■□ 3.13
CBX4-203ENST00000494546 PNMA6AP0CW24 399 aaPredicted RBP34.61■■■■□ 3.13
CBX4-203ENST00000494546 LMNB2Q03252 620 aa34.61■■■■□ 3.13
CBX4-203ENST00000494546 PDCLQ13371 301 aa34.61■■■■□ 3.13
CBX4-203ENST00000494546 MPPE1Q53F39 396 aa34.61■■■■□ 3.13
CBX4-203ENST00000494546 PASD1Q8IV76 773 aa34.61■■■■□ 3.13
CBX4-203ENST00000494546 TAB2Q9NYJ8 693 aa34.61■■■■□ 3.13
CBX4-203ENST00000494546 CLEC4EQ9ULY5 219 aa34.61■■■■□ 3.13
CBX4-203ENST00000494546 NAALADL1Q9UQQ1 740 aa34.61■■■■□ 3.13
CBX4-203ENST00000494546 SLC27A6Q9Y2P4 619 aa34.61■■■■□ 3.13
CBX4-203ENST00000494546 LATS1O95835 1130 aa34.6■■■■□ 3.13
CBX4-203ENST00000494546 TBX4P57082 545 aa34.6■■■■□ 3.13
CBX4-203ENST00000494546 KCNMA1Q12791 1236 aa34.6■■■■□ 3.13
CBX4-203ENST00000494546 ELF2Q15723 593 aa34.6■■■■□ 3.13
CBX4-203ENST00000494546 ADGRF1Q5T601 910 aa34.6■■■■□ 3.13
CBX4-203ENST00000494546 SASS6Q6UVJ0 657 aa34.6■■■■□ 3.13
CBX4-203ENST00000494546 TMEM110Q86TL2 294 aa34.6■■■■□ 3.13
CBX4-203ENST00000494546 DQX1Q8TE96 717 aaKnown RBP34.6■■■■□ 3.13
CBX4-203ENST00000494546 DUSP15Q9H1R2 295 aaPredicted RBP34.6■■■■□ 3.13
CBX4-203ENST00000494546 DYNC1LI1Q9Y6G9 523 aaKnown RBP34.6■■■■□ 3.13
CBX4-203ENST00000494546 EPN2O95208 641 aa34.59■■■■□ 3.13
CBX4-203ENST00000494546 IGLV3-27P01718 113 aa34.59■■■■□ 3.13
CBX4-203ENST00000494546 RAPGEF1Q13905 1077 aa34.59■■■■□ 3.13
CBX4-203ENST00000494546 GEN1Q17RS7 908 aa34.59■■■■□ 3.13
CBX4-203ENST00000494546 NUGGCQ68CJ6 796 aa34.59■■■■□ 3.13
CBX4-203ENST00000494546 UNC45BQ8IWX7 931 aa34.59■■■■□ 3.13
CBX4-203ENST00000494546 ERLEC1Q96DZ1 483 aa34.59■■■■□ 3.13
CBX4-203ENST00000494546 STOML2Q9UJZ1 356 aa34.59■■■■□ 3.13
CBX4-203ENST00000494546 CAPN9O14815 690 aa34.58■■■■□ 3.13
CBX4-203ENST00000494546 RHOBTB1O94844 696 aa34.58■■■■□ 3.13
CBX4-203ENST00000494546 CLCN1P35523 988 aa34.58■■■■□ 3.13
CBX4-203ENST00000494546 CCDC6Q16204 474 aa34.58■■■■□ 3.13
CBX4-203ENST00000494546 CSRP2Q16527 193 aa34.58■■■■□ 3.13
CBX4-203ENST00000494546 RSPO4Q2I0M5 234 aaPredicted RBP34.58■■■■□ 3.13
CBX4-203ENST00000494546 DPY19L2P1Q6NXN4 242 aa34.58■■■■□ 3.13
CBX4-203ENST00000494546 SLC47A2Q86VL8 602 aa34.58■■■■□ 3.13
CBX4-203ENST00000494546 ADAM32Q8TC27 787 aa34.58■■■■□ 3.13
CBX4-203ENST00000494546 RLN3Q8WXF3 142 aa34.58■■■■□ 3.13
CBX4-203ENST00000494546 TMA16Q96EY4 203 aaKnown RBP34.58■■■■□ 3.13
CBX4-203ENST00000494546 SERPINB11Q96P15 392 aa34.58■■■■□ 3.13
CBX4-203ENST00000494546 TRIM62Q9BVG3 475 aa34.58■■■■□ 3.13
CBX4-203ENST00000494546 LSM14BQ9BX40 385 aaKnown RBP34.58■■■■□ 3.13
CBX4-203ENST00000494546 CACNA2D2Q9NY47 1150 aa34.58■■■■□ 3.13
CBX4-203ENST00000494546 TJP2Q9UDY2 1190 aa34.58■■■■□ 3.13
CBX4-203ENST00000494546 PCDHGC3Q9UN70 934 aa34.58■■■■□ 3.13
CBX4-203ENST00000494546 FHOD1Q9Y613 1164 aa34.58■■■■□ 3.13
CBX4-203ENST00000494546 MYO18AQ92614 2054 aaKnown RBP34.58■■■■□ 3.13
CBX4-203ENST00000494546 SLC11A2P49281 568 aa34.57■■■■□ 3.12
CBX4-203ENST00000494546 ZNF445P59923 1031 aa34.57■■■■□ 3.12
CBX4-203ENST00000494546 KLHDC7AQ5VTJ3 777 aa34.57■■■■□ 3.12
CBX4-203ENST00000494546 SYPL2Q5VXT5 272 aa34.57■■■■□ 3.12
CBX4-203ENST00000494546 SMYD5Q6GMV2 418 aa34.57■■■■□ 3.12
CBX4-203ENST00000494546 ANKS1BQ7Z6G8 1248 aa34.57■■■■□ 3.12
CBX4-203ENST00000494546 C11orf74Q86VG3 221 aa34.57■■■■□ 3.12
CBX4-203ENST00000494546 WDTC1Q8N5D0 677 aa34.57■■■■□ 3.12
CBX4-203ENST00000494546 OLIG1Q8TAK6 271 aa34.57■■■■□ 3.12
CBX4-203ENST00000494546 PIWIL1Q96J94 861 aaKnown RBP34.57■■■■□ 3.12
CBX4-203ENST00000494546 SLC2A11Q9BYW1 496 aa34.57■■■■□ 3.12
CBX4-203ENST00000494546 PRR5-ARHGAP8B1AHC4 643 aa34.56■■■■□ 3.12
CBX4-203ENST00000494546 BCKDHBP21953 392 aa34.56■■■■□ 3.12
CBX4-203ENST00000494546 HOXD9P28356 352 aaPredicted RBP34.56■■■■□ 3.12
CBX4-203ENST00000494546 KRT9P35527 623 aa34.56■■■■□ 3.12
CBX4-203ENST00000494546 ARHGAP8P85298 464 aa34.56■■■■□ 3.12
CBX4-203ENST00000494546 RING1Q06587 406 aa34.56■■■■□ 3.12
CBX4-203ENST00000494546 DRAP1Q14919 205 aaPredicted RBP34.56■■■■□ 3.12
CBX4-203ENST00000494546 PRR23CQ6ZRP0 262 aa34.56■■■■□ 3.12
CBX4-203ENST00000494546 C11orf57Q6ZUT1 292 aaPredicted RBP34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms