RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 CASP10Q92851 521 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 LPPQ93052 612 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 ZBTB8AQ96BR9 441 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 SCLT1Q96NL6 688 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 TUBGCP5Q96RT8 1024 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 MAP7D2Q96T17 732 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 BTBD2Q9BX70 525 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 MFSD1Q9H3U5 465 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 NRBP2Q9NSY0 501 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 RBM28Q9NW13 759 aaKnown RBP5.76□□□□□ -1.49
PTCD3-219ENST00000494323 SORCS3Q9UPU3 1222 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 PMF1-BGLAPU3KQ54 211 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 COL1A2P08123 1366 aa5.76□□□□□ -1.49
PTCD3-219ENST00000494323 KLF18A0A0U1RQI7 1052 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 FSD2A1L4K1 749 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 TMEM150BA6NC51 233 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 GOLGA8AA7E2F4 631 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 GOLGA8BA8MQT2 603 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 MSH4O15457 936 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 CHMP2AO43633 222 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 EDIL3O43854 480 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 ZC3H11AO75152 810 aaKnown RBP eCLIP5.75□□□□□ -1.49
PTCD3-219ENST00000494323 DARSP14868 501 aaKnown RBP5.75□□□□□ -1.49
PTCD3-219ENST00000494323 PPM1AP35813 382 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 MTHFRP42898 656 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 RECQLP46063 649 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-219ENST00000494323 GPC3P51654 580 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 UGCGQ16739 394 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 PFKFB3Q16875 520 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-219ENST00000494323 SLFN12LQ6IEE8 588 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 FAM43BQ6ZT52 329 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-219ENST00000494323 CXXC5Q7LFL8 322 aaKnown RBP5.75□□□□□ -1.49
PTCD3-219ENST00000494323 FAM129CQ86XR2 697 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 ZNF280BQ86YH2 543 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 TPH2Q8IWU9 490 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 SMAP1Q8IYB5 467 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-219ENST00000494323 TMEFF1Q8IYR6 380 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 LRRC43Q8N309 656 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 LINC01465Q8N7H1 131 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 CCDC136Q96JN2 1154 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 NECTIN4Q96NY8 510 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 ACAP3Q96P50 834 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 NOX5Q96PH1 765 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 KRTAP17-1Q9BYP8 105 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 ZMYND12Q9H0C1 365 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 GLT8D2Q9H1C3 349 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 C6orf50Q9HD87 102 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 MKS1Q9NXB0 559 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 ZFP69BQ9UJL9 534 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 DOCK6Q96HP0 2047 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 CACNA1IQ9P0X4 2223 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 GVINP1Q7Z2Y8 2422 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 PLXNA3P51805 1871 aa5.75□□□□□ -1.49
PTCD3-219ENST00000494323 A0A087WZ62 844 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 PRR23AA6NEV1 266 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 PROB1E7EW31 1015 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 hCG_1984214I3L0E3 225 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 MAFO75444 373 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-219ENST00000494323 OFD1O75665 1012 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 PRPF6O94906 941 aaKnown RBP5.74□□□□□ -1.49
PTCD3-219ENST00000494323 SNUPNO95149 360 aaKnown RBP5.74□□□□□ -1.49
PTCD3-219ENST00000494323 GALTP07902 379 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 PF4V1P10720 104 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 BMP7P18075 431 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 KLRC2P26717 231 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 APEX1P27695 318 aaKnown RBP5.74□□□□□ -1.49
PTCD3-219ENST00000494323 NBL1P41271 181 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 GLRBP48167 497 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 PRKCEQ02156 737 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 RNASELQ05823 741 aaKnown RBP5.74□□□□□ -1.49
PTCD3-219ENST00000494323 STILQ15468 1287 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 MAP9Q49MG5 647 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 ZBTB41Q5SVQ8 909 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 PRAMEF9Q5VWM5 478 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 TWF2Q6IBS0 349 aaKnown RBP5.74□□□□□ -1.49
PTCD3-219ENST00000494323 PGM2L1Q6PCE3 622 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 Q6ZUG5 572 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 TAS1R1Q7RTX1 841 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 STK32CQ86UX6 486 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 CXorf67Q86X51 503 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-219ENST00000494323 RHPN2Q8IUC4 686 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 ADSSL1Q8N142 457 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 ZNF713Q8N859 430 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-219ENST00000494323 TDRD5Q8NAT2 981 aaKnown RBP5.74□□□□□ -1.49
PTCD3-219ENST00000494323 FNIP1Q8TF40 1166 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 SLC22A17Q8WUG5 538 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 RSAD2Q8WXG1 361 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 PHKBQ93100 1093 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 NKD2Q969F2 451 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-219ENST00000494323 LENG9Q96B70 501 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 IGSF21Q96ID5 467 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 FAM167AQ96KS9 214 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 SYT3Q9BQG1 590 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 FDXACB1Q9BRP7 624 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-219ENST00000494323 VN1R3Q9BXE9 311 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 GCOM2Q9BZD3 368 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-219ENST00000494323 OR10A5Q9H207 317 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 POFUT1Q9H488 388 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 ZCCHC4Q9H5U6 513 aa5.74□□□□□ -1.49
PTCD3-219ENST00000494323 NRDE2Q9H7Z3 1164 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms