RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 FBXO10Q9UK96 956 aa14.02□□□□□ -0.17
CTDSP1-212ENST00000494067 AGO1Q9UL18 857 aaKnown RBP14.02□□□□□ -0.17
CTDSP1-212ENST00000494067 YJEFN3A6XGL0 299 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 C4orf47A7E2U8 309 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 WASH3PC4AMC7 463 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 E7ENQ6 273 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 PMM2O15305 246 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 PENKP01210 267 aaPredicted RBP14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 SETSIPP0DME0 302 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 BRD2P25440 801 aaKnown RBP14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 ZNF132P52740 706 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 ATXN3P54252 364 aaPredicted RBP14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 APBA1Q02410 837 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 RPL6Q02878 288 aaKnown RBP14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 ARID5AQ03989 594 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 TRIM61Q5EBN2 209 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 TMEM270Q6UE05 265 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 ARMCX6Q7L4S7 300 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 RRAGAQ7L523 313 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 RABEPKQ7Z6M1 372 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 DENND1CQ8IV53 801 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 IPO4Q8TEX9 1081 aaKnown RBP14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 CLEC4CQ8WTT0 213 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 DDI1Q8WTU0 396 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 EDEM1Q92611 657 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 GOLGA1Q92805 767 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 PLD4Q96BZ4 506 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 CALCOCO1Q9P1Z2 691 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 SLC27A6Q9Y2P4 619 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 RAD54BQ9Y620 910 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 NCOR2Q9Y618 2525 aa14.01□□□□□ -0.17
CTDSP1-212ENST00000494067 LNP1A1A4G5 178 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 P4HA2O15460 535 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 MSI1O43347 362 aaKnown RBP14□□□□□ -0.17
CTDSP1-212ENST00000494067 NDUFS2O75306 463 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 FGFR1OPO95684 399 aaKnown RBP14□□□□□ -0.17
CTDSP1-212ENST00000494067 GNA14O95837 355 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 PAEPP09466 180 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 HOXD12P35452 270 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 RGS7P49802 495 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 SGSHP51688 502 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 ZNF445P59923 1031 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 STILQ15468 1287 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 GEN1Q17RS7 908 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 MPPE1Q53F39 396 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 PMF1Q6P1K2 205 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 FAM217AQ8IXS0 508 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 PPM1KQ8N3J5 372 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 CPXM2Q8N436 756 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 RBBP8NLQ8NC74 664 aaPredicted RBP14□□□□□ -0.17
CTDSP1-212ENST00000494067 CEP76Q8TAP6 659 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 SLC35F5Q8WV83 523 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 KCTD13Q8WZ19 329 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 CNTNAP3BQ96NU0 1288 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 SLC2A11Q9BYW1 496 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 CNTNAP3Q9BZ76 1288 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 CNGB3Q9NQW8 809 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 ABCC13Q9NSE7 274 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 CACNA2D2Q9NY47 1150 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 SFMBT1Q9UHJ3 866 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 EVLQ9UI08 416 aaPredicted RBP14□□□□□ -0.17
CTDSP1-212ENST00000494067 WDR3Q9UNX4 943 aaKnown RBP eCLIP14□□□□□ -0.17
CTDSP1-212ENST00000494067 PCDHB4Q9Y5E5 795 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 ADAMTS9Q9P2N4 1935 aa14□□□□□ -0.17
CTDSP1-212ENST00000494067 ATXN2Q99700 1313 aaKnown RBP13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 TIMM44O43615 452 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 SYNCRIPO60506 623 aaKnown RBP13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 KCNK5O95279 499 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 LCP1P13796 627 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 PTGER3P43115 390 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 NOVA1P51513 510 aaKnown RBP13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 MFAP3P55082 362 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 MARSP56192 900 aaKnown RBP13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 DAOAP59103 153 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 IRX4P78413 519 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 KCNH2Q12809 1159 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 TRIP4Q15650 581 aaPredicted RBP13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 CAMK4Q16566 473 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 DUOXA1Q1HG43 343 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 SYCP2LQ5T4T6 812 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 BSPRYQ5W0U4 402 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 TMEM215Q68D42 235 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 GJB7Q6PEY0 223 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 FOXR2Q6PJQ5 311 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 LCLAT1Q6UWP7 414 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 KIAA1324Q6UXG2 1013 aaKnown RBP13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 ANKS1BQ7Z6G8 1248 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 FMNL3Q8IVF7 1028 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 GABRG3Q99928 467 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 SRRTQ9BXP5 876 aaKnown RBP13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 ACP6Q9NPH0 428 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 TMEM74BQ9NUR3 256 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 ANGPTL2Q9UKU9 493 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 HBS1LQ9Y450 684 aaKnown RBP13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 STON1Q9Y6Q2 735 aa13.99□□□□□ -0.17
CTDSP1-212ENST00000494067 PCDH15Q96QU1 1955 aa13.98□□□□□ -0.17
CTDSP1-212ENST00000494067 CFIP05156 583 aa13.98□□□□□ -0.17
CTDSP1-212ENST00000494067 NDUFV2P19404 249 aa13.98□□□□□ -0.17
CTDSP1-212ENST00000494067 GFPT1Q06210 699 aaPredicted RBP13.98□□□□□ -0.17
CTDSP1-212ENST00000494067 ZNF33AQ06730 810 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms