RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 SLC39A13Q96H72 371 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 RBM41Q96IZ5 413 aaKnown RBP11.85□□□□□ -0.51
MCF2L-231ENST00000494043 NACA2Q9H009 215 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 ATXN3LQ9H3M9 355 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 TRPC7Q9HCX4 862 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.85□□□□□ -0.517e-7■■■■□ 21.4
MCF2L-231ENST00000494043 GPATCH2LQ9NWQ4 482 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 CDC23Q9UJX2 597 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 FZD10Q9ULW2 581 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 AP4E1Q9UPM8 1137 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 TLR6Q9Y2C9 796 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 MTCH2Q9Y6C9 303 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 SLC12A8A0AV02 714 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 LRRD1A4D1F6 860 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 C3orf70A6NLC5 250 aaPredicted RBP11.84□□□□□ -0.51
MCF2L-231ENST00000494043 PI4K2BG5E9Z4 385 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 LINC01565O15544 149 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 CEP104O60308 925 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 ZRANB2O95218 330 aaKnown RBP eCLIP11.84□□□□□ -0.51
MCF2L-231ENST00000494043 OLFM2O95897 454 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 IGLV3-27P01718 113 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 SLC2A3P11169 496 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 PFKLP17858 780 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 CCR1P32246 355 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 ADRA1BP35368 520 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 CCR2P41597 374 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 ARSEP51690 589 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 RING1Q06587 406 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 ADGRE1Q14246 886 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 DPYSL2Q16555 572 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 CA9Q16790 459 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 WHAMMP3Q1A5X7 153 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 ARL13BQ3SXY8 428 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 ODF2Q5BJF6 829 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 ZC3H12AQ5D1E8 599 aaKnown RBP11.84□□□□□ -0.51
MCF2L-231ENST00000494043 EFHC2Q5JST6 749 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 PRSS36Q5K4E3 855 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 RARS2Q5T160 578 aaKnown RBP11.84□□□□□ -0.51
MCF2L-231ENST00000494043 TXNDC8Q6A555 127 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 ANKRD54Q6NXT1 300 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 AADACL2Q6P093 401 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 TMC5Q6UXY8 1006 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 GRASPQ7Z6J2 395 aaPredicted RBP11.84□□□□□ -0.51
MCF2L-231ENST00000494043 CREG2Q8IUH2 290 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 CCDC50Q8IVM0 306 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 RASGEF1CQ8N431 466 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 KCTD6Q8NC69 237 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 RAPGEF5Q92565 580 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 TCEAL4Q96EI5 215 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 LRCH3Q96II8 777 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 CAPZA3Q96KX2 299 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 FCRL2Q96LA5 508 aaPredicted RBP11.84□□□□□ -0.51
MCF2L-231ENST00000494043 TKTL2Q9H0I9 626 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 WDCPQ9H6R7 721 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 L2HGDHQ9H9P8 463 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 PIDD1Q9HB75 910 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 ANLNQ9NQW6 1124 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 ARHGEF38Q9NXL2 777 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 HBS1LQ9Y450 684 aaKnown RBP11.84□□□□□ -0.51
MCF2L-231ENST00000494043 REV3LO60673 3130 aa11.84□□□□□ -0.51
MCF2L-231ENST00000494043 OBSL1O75147 1896 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 TRAV19A0A0A6YYK7 116 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 KCNU1A8MYU2 1149 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 I6L893 689 aaPredicted RBP11.83□□□□□ -0.52
MCF2L-231ENST00000494043 PGRMC1O00264 195 aaKnown RBP11.83□□□□□ -0.52
MCF2L-231ENST00000494043 ZNF197O14709 1029 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 MOSPD3O75425 235 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 APOEP02649 317 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 GJA1P17302 382 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 KDELR1P24390 212 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 DDX6P26196 483 aaKnown RBP eCLIP11.83□□□□□ -0.52
MCF2L-231ENST00000494043 PTPN7P35236 360 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 CDH6P55285 790 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 COPS2P61201 443 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 NTHL1P78549 312 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 ADAM15Q13444 863 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 KRT81Q14533 505 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 PDK2Q15119 407 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 PPP2R5EQ16537 467 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 TAZQ16635 292 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 SLC5A9Q2M3M2 681 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 ARHGAP15Q53QZ3 475 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 STXBP5Q5T5C0 1151 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 MFSD7Q6UXD7 560 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 SPOCD1Q6ZMY3 1216 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 VSIG1Q86XK7 387 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 ARL14EPQ8N8R7 260 aaPredicted RBP11.83□□□□□ -0.52
MCF2L-231ENST00000494043 FAM71BQ8TC56 605 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 ACTRT1Q8TDG2 376 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 RNF25Q96BH1 459 aaPredicted RBP11.83□□□□□ -0.52
MCF2L-231ENST00000494043 MS4A14Q96JA4 679 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 SLC22A12Q96S37 553 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 KCTD15Q96SI1 283 aaPredicted RBP11.83□□□□□ -0.52
MCF2L-231ENST00000494043 KLF16Q9BXK1 252 aaPredicted RBP11.83□□□□□ -0.52
MCF2L-231ENST00000494043 RNF38Q9H0F5 515 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 DHX35Q9H5Z1 703 aaKnown RBP11.83□□□□□ -0.52
MCF2L-231ENST00000494043 PCDH18Q9HCL0 1135 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 TMPRSS4Q9NRS4 437 aa11.83□□□□□ -0.52
MCF2L-231ENST00000494043 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.83□□□□□ -0.52
MCF2L-231ENST00000494043 MTMR10Q9NXD2 777 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms