RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 RPF1Q9H9Y2 349 aaKnown RBP6.34□□□□□ -1.39
CPSF7-213ENST00000494016 FAM114A2Q9NRY5 505 aa6.34□□□□□ -1.39
CPSF7-213ENST00000494016 ZDHHC18Q9NUE0 388 aa6.34□□□□□ -1.39
CPSF7-213ENST00000494016 DDX56Q9NY93 547 aaKnown RBP6.34□□□□□ -1.39
CPSF7-213ENST00000494016 GRHL1Q9NZI5 618 aa6.34□□□□□ -1.39
CPSF7-213ENST00000494016 GMIPQ9P107 970 aa6.34□□□□□ -1.39
CPSF7-213ENST00000494016 ANAPC7Q9UJX3 599 aa6.34□□□□□ -1.39
CPSF7-213ENST00000494016 TPX2Q9ULW0 747 aaKnown RBP6.34□□□□□ -1.39
CPSF7-213ENST00000494016 COMMD10Q9Y6G5 202 aa6.34□□□□□ -1.39
CPSF7-213ENST00000494016 KAT6AQ92794 2004 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 A0A1B0GUA9 196 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 MANSC4A6NHS7 340 aaPredicted RBP6.33□□□□□ -1.4
CPSF7-213ENST00000494016 GOLGA8KD6RF30 607 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 O00370 1275 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 TSPAN1O60635 241 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 GPR32O75388 356 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 GJB6O95452 261 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 TNNC2P02585 160 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 CEACAM5P06731 702 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 ZNF865P0CJ78 1059 aaPredicted RBP6.33□□□□□ -1.4
CPSF7-213ENST00000494016 CD58P19256 250 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 HSD17B3P37058 310 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 ETV3P41162 512 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 RPL21P46778 160 aaKnown RBP6.33□□□□□ -1.4
CPSF7-213ENST00000494016 RAD23BP54727 409 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 RPL7AP62424 266 aaKnown RBP6.33□□□□□ -1.4
CPSF7-213ENST00000494016 OGDHQ02218 1023 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 CRHR2Q13324 411 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 COL9A2Q14055 689 aaPredicted RBP6.33□□□□□ -1.4
CPSF7-213ENST00000494016 HLTFQ14527 1009 aaKnown RBP eCLIP6.33□□□□□ -1.4
CPSF7-213ENST00000494016 ZNF699Q32M78 642 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 ZNF568Q3ZCX4 644 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 SFRP5Q5T4F7 317 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 SEL1L2Q5TEA6 688 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 DAB2IPQ5VWQ8 1189 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 JADE1Q6IE81 842 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 PPP1R2P3Q6NXS1 205 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 LRIG3Q6UXM1 1119 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 ANKS1BQ7Z6G8 1248 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 SLC4A11Q8NBS3 891 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 OR6J1Q8NGC5 347 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 USP6NLQ92738 828 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 KAT2BQ92831 832 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 C18orf8Q96DM3 657 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 FAXDC2Q96IV6 333 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 ANKRD36BP1Q96IX9 119 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 COX4I2Q96KJ9 171 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 PPP1R16BQ96T49 567 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 ZNF518BQ9C0D4 1074 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 ELOVL4Q9GZR5 314 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 CXCL16Q9H2A7 254 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 LHX5Q9H2C1 402 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 TNKS2Q9H2K2 1166 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 EPB41L4BQ9H329 900 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 ASB7Q9H672 318 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 FAM204AQ9H8W3 233 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 TMBIM4Q9HC24 238 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 MRPL47Q9HD33 250 aaKnown RBP6.33□□□□□ -1.4
CPSF7-213ENST00000494016 SETD4Q9NVD3 440 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 FLRT1Q9NZU1 646 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 CPA4Q9UI42 421 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 AKT3Q9Y243 479 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 PLAAQ9Y263 795 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 SNX24Q9Y343 169 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 UTP11Q9Y3A2 253 aaKnown RBP6.33□□□□□ -1.4
CPSF7-213ENST00000494016 DOCK3Q8IZD9 2030 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 TRIP11Q15643 1979 aa6.33□□□□□ -1.4
CPSF7-213ENST00000494016 RRN3P2A6NIE6 340 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 MEIS3P2A8K0S8 358 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 PODXLO00592 558 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 ENPP3O14638 875 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 TP73O15350 636 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 ZEB2O60315 1214 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 PPFIA2O75334 1257 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 RPS6KA5O75582 802 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 STK10O94804 968 aaKnown RBP6.32□□□□□ -1.4
CPSF7-213ENST00000494016 LSM8O95777 96 aaKnown RBP6.32□□□□□ -1.4
CPSF7-213ENST00000494016 PAEPP09466 180 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 TCF4P15884 667 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 FGFR4P22455 802 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 IVDP26440 423 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 TMOD1P28289 359 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 HOXA11P31270 313 aaPredicted RBP6.32□□□□□ -1.4
CPSF7-213ENST00000494016 ATICP31939 592 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 MAN1A1P33908 653 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 RAP1GAPP47736 663 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 YWHAEP62258 255 aaKnown RBP6.32□□□□□ -1.4
CPSF7-213ENST00000494016 ADAM17P78536 824 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 PPFIA1Q13136 1202 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 KLF1Q13351 362 aaPredicted RBP6.32□□□□□ -1.4
CPSF7-213ENST00000494016 LLGL1Q15334 1064 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 ZBTB6Q15916 424 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 DGKDQ16760 1214 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 FAM110CQ1W6H9 321 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 WDR72Q3MJ13 1102 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 ATP13A4Q4VNC1 1196 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 ZNF667Q5HYK9 610 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 CDCP2Q5VXM1 449 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 OVOS1Q6IE37 1185 aa6.32□□□□□ -1.4
CPSF7-213ENST00000494016 FBXO46Q6PJ61 603 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms